RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 DMRTA2Q96SC8 542 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TIMP4Q99727 224 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TREX2Q9BQ50 279 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SPATA9Q9BWV2 254 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 UGT2B28Q9BY64 529 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 LAT2Q9GZY6 243 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 CACYBPQ9HB71 228 aaKnown RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 BCL2L10Q9HD36 194 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 MED11Q9P086 117 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 SLAMF8Q9P0V8 285 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-212ENST00000489728 TINAGQ9UJW2 476 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 ICAM5Q9UMF0 924 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 L3MBTL1Q9Y468 752 aa10.05□□□□□ -0.8
CPSF7-212ENST00000489728 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ETV2O00321 342 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 FBP2O00757 339 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SHOX2O60902 331 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SEMA7AO75326 666 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 CSTAP01040 98 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 C1QCP02747 245 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 BCHEP06276 602 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ARAFP10398 606 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ESRRAP11474 423 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 PEPDP12955 493 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 NID1P14543 1247 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ETS2P15036 469 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 BMP7P18075 431 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 HK1P19367 917 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ELK4P28324 431 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SLC6A8P48029 635 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SMSP52788 366 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 GYS2P54840 703 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 B3GALT5-AS1P59052 145 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 CHRNEQ04844 493 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SRSF1Q07955 248 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SKP2Q13309 424 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 MAPK11Q15759 364 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 PLPPR5Q32ZL2 321 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 MMEL1Q495T6 779 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 LIN52Q52LA3 116 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 GCNT6Q5T4J0 391 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 RNF220Q5VTB9 566 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 RAET1LQ5VY80 246 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ARPINQ7Z6K5 226 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SERPINA11Q86U17 422 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 FJX1Q86VR8 437 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SLC30A8Q8IWU4 369 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF440Q8IYI8 595 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ULK2Q8IYT8 1036 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF614Q8N883 585 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 GATSQ8NAP1 163 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 OR5W2Q8NH69 310 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 SLC35B4Q969S0 331 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 TMEM19Q96HH6 336 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 FAM107BQ9H098 131 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 MYLK2Q9H1R3 596 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ARMC7Q9H6L4 198 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 PNPLA3Q9NST1 481 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 GID8Q9NWU2 228 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 KCNE5Q9UJ90 142 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 AP3M1Q9Y2T2 418 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 ARL2BPQ9Y2Y0 163 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 IFT52Q9Y366 437 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 AP4B1Q9Y6B7 739 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 DNAJC13O75165 2243 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 LRRK2Q5S007 2527 aa10.04□□□□□ -0.8
CPSF7-212ENST00000489728 USP9XQ93008 2570 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-212ENST00000489728 NPIPA5A0A0B4J1W7 369 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 OR2M5A3KFT3 312 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 C17orf51A8MQB3 221 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 C5orf58C9J3I9 102 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 NPIPA7E9PJI5 369 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 FAAHO00519 579 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 MRASO14807 208 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 DCTN3O75935 186 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 NPIPA8P0DM63 369 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CD1EP15812 388 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 IL7RP16871 459 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF708P17019 499 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 PGCP20142 388 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 PRDX6P30041 224 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 PGM1P36871 562 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 LHX2P50458 406 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 DLX5P56178 289 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
CPSF7-212ENST00000489728 KCNJ10P78508 379 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CBFBQ13951 182 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 LARS2Q15031 903 aaKnown RBP10.03□□□□□ -0.8
CPSF7-212ENST00000489728 MAPK14Q16539 360 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 SLC25A53Q5H9E4 307 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 DOPEY1Q5JWR5 2465 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 C1orf185Q5T7R7 199 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 REP15Q6BDI9 236 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms