RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 REEP4Q9H6H4 257 aa10.49□□□□□ -0.73
ACTN4-206ENST00000489451 ZNF701Q9NV72 531 aaPredicted RBP10.49□□□□□ -0.73
ACTN4-206ENST00000489451 C1orf109Q9NX04 203 aa10.49□□□□□ -0.73
ACTN4-206ENST00000489451 MRTO4Q9UKD2 239 aaKnown RBP10.49□□□□□ -0.73
ACTN4-206ENST00000489451 NUP214P35658 2090 aaPredicted RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 A0A087WZY1 265 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 NPIPA5A0A0B4J1W7 369 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 TTC36A6NLP5 189 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 INAFM1C9JVW0 142 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 NPIPA7E9PJI5 369 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 AZIN1O14977 448 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 NPHS1O60500 1241 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ERLIN1O75477 346 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 GCM2O75603 506 aaPredicted RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 SOX30O94993 753 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 CNOT4O95628 575 aaKnown RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 CHRNGP07510 517 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 MYZAPP0CAP1 466 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 NPIPA8P0DM63 369 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 NEFHP12036 1026 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ALDH3A1P30838 453 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ARRB2P32121 409 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 GPC1P35052 558 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 CLK3P49761 638 aaKnown RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 RNF144AP50876 292 aaPredicted RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 RAC1P63000 192 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 RPL38P63173 70 aaKnown RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 FOXF1Q12946 379 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 TSC22D1Q15714 1073 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 BEX5Q5H9J7 111 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 KANK2Q63ZY3 851 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 PPP4R4Q6NUP7 873 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 CBLN3Q6UW01 205 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 LSRQ86X29 649 aaPredicted RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 OR2V1Q8NHB1 315 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 RAB3IL1Q8TBN0 382 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ACTRT2Q8TDY3 377 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 RNF128Q8TEB7 428 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ABHD3Q8WU67 409 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ROBO4Q8WZ75 1007 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 FAM120BQ96EK7 910 aaKnown RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 PLPPR2Q96GM1 343 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ACTR6Q9GZN1 396 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 CENPHQ9H3R5 247 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 COQ10BQ9H8M1 238 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 C3orf14Q9HBI5 128 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 ACSS1Q9NUB1 689 aaPredicted RBP10.48□□□□□ -0.73
ACTN4-206ENST00000489451 SLC17A7Q9P2U7 560 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 GIMAP2Q9UG22 337 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 EMC9Q9Y3B6 208 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 FIS1Q9Y3D6 152 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 DNAJC15Q9Y5T4 150 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 KCNE3Q9Y6H6 103 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
ACTN4-206ENST00000489451 A0A1W2PQD3 144 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 HS3ST1O14792 307 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 LINC00032P0C843 101 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 PSMB1P20618 241 aaKnown RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 EDNRAP25101 427 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 NR1H2P55055 460 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ZNF117Q03924 483 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 TOMM34Q15785 309 aaPredicted RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ZNF239Q16600 458 aaKnown RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 NDUFAF6Q330K2 333 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 CEP85LQ5SZL2 805 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 CPTPQ5TA50 214 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 TFAP2EQ6VUC0 442 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ESPNLQ6ZVH7 1005 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 PLEKHM3Q6ZWE6 761 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 NUFIP2Q7Z417 695 aaKnown RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 SZRD1Q7Z422 152 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 WFDC8Q8IUA0 241 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 WDR75Q8IWA0 830 aaKnown RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 GABRG1Q8N1C3 465 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 CDS1Q92903 461 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ZBTB8AQ96BR9 441 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ZBED6CLQ96FA7 236 aaPredicted RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 KLHL15Q96M94 604 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 BDH2Q9BUT1 245 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 C12orf49Q9H741 205 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 ING1Q9UK53 422 aaPredicted RBP10.47□□□□□ -0.73
ACTN4-206ENST00000489451 TRAF6Q9Y4K3 522 aa10.47□□□□□ -0.73
ACTN4-206ENST00000489451 HIVEP2P31629 2446 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 NPIPB9F8W1W9 429 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 PLGP00747 810 aaPredicted RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 HMGN2P05204 90 aaKnown RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 FGF4P08620 206 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 BCKDHAP12694 445 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 PPP3CBP16298 524 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 DDX5P17844 614 aaKnown RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 SFTPDP35247 375 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 MANFP55145 182 aaKnown RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 CTBP2P56545 445 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 LASP1Q14847 261 aaKnown RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 MLC1Q15049 377 aa10.46□□□□□ -0.73
ACTN4-206ENST00000489451 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.73
ACTN4-206ENST00000489451 HBMQ6B0K9 141 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms