RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 DTNAQ9Y4J8 743 aa8.24□□□□□ -1.09
HDAC6-232ENST00000489053 NCOA6Q14686 2063 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-232ENST00000489053 CSMD1Q96PZ7 3565 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 NPIPA5A0A0B4J1W7 369 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 A0A1W2PNV4 684 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SHISA8B8ZZ34 492 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 NPIPA7E9PJI5 369 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 POLR3GO15318 223 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 TNFRSF21O75509 655 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 TGM6O95932 706 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 NPIPA8P0DM63 369 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 UQCRBP14927 111 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SFTPDP35247 375 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 MAP3K8P41279 467 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 P2RX1P51575 399 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SUMO3P55854 103 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CLDN20P56880 219 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 B3GALT5-AS1P59052 145 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 RAC1P63000 192 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF117Q03924 483 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 FOXF2Q12947 444 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CBFBQ13951 182 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 FBXL19-AS1Q494R0 122 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 TNFAIP8L3Q5GJ75 292 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SPANXN4Q5MJ08 99 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 AGBL2Q5U5Z8 902 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 HBMQ6B0K9 141 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 TNFAIP8L2Q6P589 184 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 PLXDC2Q6UX71 529 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 APOOLQ6UXV4 268 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF621Q6ZSS3 439 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 ESPNLQ6ZVH7 1005 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 EIF3MQ7L2H7 374 aaKnown RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 ZAR1Q86SH2 424 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CLEC4FQ8N1N0 589 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 GLB1L3Q8NCI6 653 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 ATP6V1C2Q8NEY4 427 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 FNDC9Q8TBE3 224 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 FAM110BQ8TC76 370 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 NUDT8Q8WV74 236 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 HOXB13Q92826 284 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SH3GL2Q99962 352 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 TREX2Q9BQ50 279 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 C20orf27Q9GZN8 174 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 OR51I1Q9H343 314 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 WDR55Q9H6Y2 383 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 RMND5AQ9H871 391 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 SERINC1Q9NRX5 453 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 GPATCH2Q9NW75 528 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 FBXO34Q9NWN3 711 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CLCF1Q9UBD9 225 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 HAO1Q9UJM8 370 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 CARD8Q9Y2G2 431 aa8.23□□□□□ -1.09
HDAC6-232ENST00000489053 GPC6Q9Y625 555 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-232ENST00000489053 INTS1Q8N201 2190 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SPG11Q96JI7 2443 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 C7orf72A4D263 438 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SERINC4A6NH21 518 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CCDC154A6NI56 674 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 H0YC42 278 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SDHDO14521 159 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 RFXANKO14593 260 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 TNFSF11O14788 317 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 MSTNO14793 375 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 UBDO15205 165 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF264O43296 627 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 EIF4E2O60573 245 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SNNO75324 88 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SLC22A3O75751 556 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 KRT75O95678 551 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CSTAP01040 98 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 OPN1LWP04000 364 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 IL6P05231 212 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 PGRP06401 933 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 OR12D1P0DN82 309 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 EPXP11678 715 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 ELK4P28324 431 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 SUCLG1P53597 346 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CASP9P55211 416 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 TPD52P55327 224 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 DLX5P56178 289 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CARD18P57730 90 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 TXNL4AP83876 142 aaKnown RBP8.22□□□□□ -1.09
HDAC6-232ENST00000489053 CD226Q15762 336 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 EXOC3L2Q2M3D2 409 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 PLPPR5Q32ZL2 321 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 KLHL26Q53HC5 615 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 C6orf10Q5SRN2 563 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 PDZK1Q5T2W1 519 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 HDXQ7Z353 690 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 LILRA2Q8N149 483 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 METTL25Q8N6Q8 603 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 OR5W2Q8NH69 310 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 OR10D3Q8NH80 312 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 OR2V1Q8NHB1 315 aa8.22□□□□□ -1.09
HDAC6-232ENST00000489053 ZNF563Q8TA94 476 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms