RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PRRG4Q9BZD6 226 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 HOXD1Q9GZZ0 328 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 TMEM185BQ9H7F4 350 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 KCNK9Q9NPC2 374 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 EDARQ9UNE0 448 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-213ENST00000489045 ACTL7BQ9Y614 415 aa20.65■□□□□ 0.9
COL9A3-213ENST00000489045 MTORP42345 2549 aa20.64■□□□□ 0.9
COL9A3-213ENST00000489045 OIP5O43482 229 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 SOX30O94993 753 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 SNUPNO95149 360 aaKnown RBP20.64■□□□□ 0.89
COL9A3-213ENST00000489045 RPS26P62854 115 aaKnown RBP20.64■□□□□ 0.89
COL9A3-213ENST00000489045 RAC1P63000 192 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 FGFBP1Q14512 234 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 KLHL26Q53HC5 615 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.64■□□□□ 0.89
COL9A3-213ENST00000489045 BHLHB9Q6PI77 547 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 PLEKHF2Q9H8W4 249 aa20.64■□□□□ 0.89
COL9A3-213ENST00000489045 HEATR5AQ86XA9 2040 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 TNFSF11O14788 317 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CASKO14936 926 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CXCL13O43927 109 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 LINGO3P0C6S8 592 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CD8BP10966 210 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 POU2F1P14859 743 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 IL11P20809 199 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 ME2P23368 584 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 PCYT1AP49585 367 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 ATP12AP54707 1039 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 FOXF1Q12946 379 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CBLN3Q6UW01 205 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 FAM214BQ7L5A3 538 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CLEC4FQ8N1N0 589 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 ZNF614Q8N883 585 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 OR2V1Q8NHB1 315 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 DPY30Q9C005 99 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 SERHL2Q9H4I8 314 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 PAQR5Q9NXK6 330 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-213ENST00000489045 KLHL28Q9NXS3 571 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 HAO1Q9UJM8 370 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 MCTS1Q9ULC4 181 aaKnown RBP20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CLEC4AQ9UMR7 237 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 PROCRQ9UNN8 238 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 CARD8Q9Y2G2 431 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 C2CD3Q4AC94 2353 aa20.63■□□□□ 0.89
COL9A3-213ENST00000489045 SETD2Q9BYW2 2564 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-213ENST00000489045 A0A0J9YW62 118 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 RNF103-CHMP3A0A140T963 221 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 NPIPB9F8W1W9 429 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 H3BNH8 94 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 RNASET2O00584 256 aaKnown RBP20.62■□□□□ 0.89
COL9A3-213ENST00000489045 ADAMDEC1O15204 470 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 NUDT14O95848 222 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 RAF1P04049 648 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 CCKARP32238 428 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 KCNJ5P48544 419 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 P2RX1P51575 399 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 STX3Q13277 289 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 NDUFAF6Q330K2 333 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 ESPNLQ6ZVH7 1005 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 C6orf120Q7Z4R8 191 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 ZNF610Q8N9Z0 462 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 OR8J2Q8NGG1 315 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 OR4A15Q8NGL6 344 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 SLC35G5Q96KT7 338 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 WFIKKN1Q96NZ8 548 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 PAIP2Q9BPZ3 127 aaKnown RBP20.62■□□□□ 0.89
COL9A3-213ENST00000489045 SLC39A3Q9BRY0 314 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 NUF2Q9BZD4 464 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 ELOVL5Q9NYP7 299 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 ICAM5Q9UMF0 924 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 DTNAQ9Y4J8 743 aa20.62■□□□□ 0.89
COL9A3-213ENST00000489045 A0A1W2PPR1 153 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 ATE1O95260 518 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 SYNGR4O95473 234 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 PLGP00747 810 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-213ENST00000489045 MATN1P21941 496 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 UGT2B10P36537 528 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 EIF1P41567 113 aaKnown RBP20.61■□□□□ 0.89
COL9A3-213ENST00000489045 SUMO3P55854 103 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-213ENST00000489045 BST1Q10588 318 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 HBMQ6B0K9 141 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 CROCCP2Q86T23 111 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 KIRREL3Q8IZU9 778 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 LILRA2Q8N149 483 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 CHDHQ8NE62 594 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-213ENST00000489045 GMPPAQ96IJ6 420 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-213ENST00000489045 KLHL15Q96M94 604 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 SDF2Q99470 211 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 PNPOQ9NVS9 261 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 EMC9Q9Y3B6 208 aa20.61■□□□□ 0.89
COL9A3-213ENST00000489045 UQCRHLA0A096LP55 91 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 GTPBP1O00178 669 aaKnown RBP20.6■□□□□ 0.89
COL9A3-213ENST00000489045 SS18L1O75177 396 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-213ENST00000489045 ELK4P28324 431 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 SHC1P29353 583 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 SFTPDP35247 375 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 CTBP2P56545 445 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 KEAP1Q14145 624 aa20.6■□□□□ 0.89
COL9A3-213ENST00000489045 PDSS1Q5T2R2 415 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms