RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TPD52P55327 224 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 RAC1P63000 192 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 ZNF117Q03924 483 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 BST1Q10588 318 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 TESK1Q15569 626 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 CD226Q15762 336 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 PDSS1Q5T2R2 415 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 PPP4R4Q6NUP7 873 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 VWA1Q6PCB0 445 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 ESPNLQ6ZVH7 1005 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 ANKRD42Q8N9B4 389 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 OR4A15Q8NGL6 344 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 LINC01560Q8TB33 94 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 TESCQ96BS2 214 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 TLCD1Q96CP7 247 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 STARD4Q96DR4 205 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 ZNF845Q96IR2 970 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 RNF145Q96MT1 663 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 MEAF6Q9HAF1 191 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 EXD2Q9NVH0 621 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 CELSR1Q9NYQ6 3014 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 CCDC168Q8NDH2 2452 aa12.42□□□□□ -0.42
SPTLC1-207ENST00000488921 PRSS51A0A1B0GVH4 220 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 TMEM120BA0PK00 339 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 SH3D21A4FU49 640 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 GTPBP1O00178 669 aaKnown RBP12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 SYNGR4O95473 234 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 AGR2O95994 175 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 CD8BP10966 210 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 MATN1P21941 496 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 ADH6P28332 368 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 P2RX1P51575 399 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 ART1P52961 327 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 SIRPAP78324 504 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 MPP2Q14168 576 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 KLHL26Q53HC5 615 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 ATG16L1Q676U5 607 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 OGFOD2Q6N063 350 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 FAM214BQ7L5A3 538 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 C6orf120Q7Z4R8 191 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 CDC20BQ86Y33 519 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 CLECL1Q8IZS7 167 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 ZNF614Q8N883 585 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 CHDHQ8NE62 594 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 OR5D16Q8NGK9 328 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 OR10D3Q8NH80 312 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 RAB3IL1Q8TBN0 382 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 NUDT8Q8WV74 236 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 NMUR2Q9GZQ4 415 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 ST6GALNAC2Q9UJ37 374 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 EMC9Q9Y3B6 208 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 DTNAQ9Y4J8 743 aa12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-207ENST00000488921 NPIPA5A0A0B4J1W7 369 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 TRPC5OSA6NMA1 111 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 GJE1A6NN92 205 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 E9PBE3 544 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 NPIPA7E9PJI5 369 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 CASKO14936 926 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 STX11O75558 287 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 PLGP00747 810 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 NPIPA8P0DM63 369 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 UQCRC2P22695 453 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 DNASE1P24855 282 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 PSMA4P25789 261 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 CD79BP40259 229 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 SLC18A1P54219 525 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 C16orf62Q7Z3J2 963 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 TMCO5AQ8N6Q1 288 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 OR6K3Q8NGY3 331 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 MIPOL1Q8TD10 442 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 OIT3Q8WWZ8 545 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 NRGNQ92686 78 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 GMPPAQ96IJ6 420 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 ADGRG7Q96K78 797 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 SDF2Q99470 211 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 FANCFQ9NPI8 374 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 TIGARQ9NQ88 270 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 PNPOQ9NVS9 261 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 THAP1Q9NVV9 213 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 PROCRQ9UNN8 238 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 CARD8Q9Y2G2 431 aa12.4□□□□□ -0.42
SPTLC1-207ENST00000488921 HRNRQ86YZ3 2850 aaPredicted RBP12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 NPIPB9F8W1W9 429 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 SLCO1B7G3V0H7 640 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ANKRD28O15084 1053 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 HDAC3O15379 428 aa12.39□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF264O43296 627 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms