RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 NNATQ16517 81 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 ABHD17BQ5VST6 288 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 WDR53Q7Z5U6 358 aaPredicted RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 TSPYL5Q86VY4 417 aaPredicted RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 ARMC8Q8IUR7 673 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 LGI4Q8N135 537 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 BEST3Q8N1M1 668 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 SFXN5Q8TD22 340 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 MUL1Q969V5 352 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 ZNF354BQ96LW1 612 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 MS4A4EQ96PG1 132 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 ZNF300Q96RE9 604 aaPredicted RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 NXF5Q9H1B4 397 aaKnown RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 EQTNQ9NQ60 294 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 STMN3Q9NZ72 180 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 TEKT2Q9UIF3 430 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 SNX5Q9Y5X3 404 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 CNTRLQ7Z7A1 2325 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 MRPS14O60783 128 aaKnown RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 NOL3O60936 208 aaKnown RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 OPN1SWP03999 348 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 MFAP5Q13361 173 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 TP53BP2Q13625 1128 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 SPDYE7PQ495Y7 208 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 IGFL2Q6UWQ7 119 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 NODALQ96S42 347 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 RASL10BQ96S79 203 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 PSD2Q9BQI7 771 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 PAK1IP1Q9NWT1 392 aaPredicted RBP17.81■□□□□ 0.44
CCM2-216ENST00000488727 TP53TG5Q9Y2B4 290 aa17.81■□□□□ 0.44
CCM2-216ENST00000488727 ERVH48-1M5A8F1 160 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 TNFRSF11BO00300 401 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 ATE1O95260 518 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 NADKO95544 446 aaPredicted RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 F10P00742 488 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 ALPPP05187 535 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 HMGN2P05204 90 aaKnown RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 CT45A8P0DMV1 189 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 CT45A9P0DMV2 189 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 PCMT1P22061 227 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 NR0B1P51843 470 aaKnown RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 PSG6Q00889 435 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 ZNF155Q12901 538 aaPredicted RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 NPRL3Q12980 569 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 CT45A2Q5DJT8 189 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 ZNF468Q5VIY5 522 aaPredicted RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 HLA-DQA1Q5Y7H0 255 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 MFSD12Q6NUT3 480 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 NPSR1Q6W5P4 371 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 C17orf47Q8NEP4 570 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 OR56A1Q8NGH5 318 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 CNIH3Q8TBE1 160 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 GIPC3Q8TF64 312 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 SGCDQ92629 289 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 C16orf58Q96GQ5 468 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 TUBD1Q9UJT1 453 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 GPR55Q9Y2T6 319 aaPredicted RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 YARS2Q9Y2Z4 477 aaKnown RBP17.8■□□□□ 0.44
CCM2-216ENST00000488727 TPRKBQ9Y3C4 175 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 EXPH5Q8NEV8 1989 aa17.8■□□□□ 0.44
CCM2-216ENST00000488727 CYP4B1P13584 511 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 MATN1P21941 496 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 PPICP45877 212 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 CD97P48960 835 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 CASP9P55211 416 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 IL1RL1Q01638 556 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 MAD2L1BPQ15013 274 aaPredicted RBP17.79■□□□□ 0.44
CCM2-216ENST00000488727 EXOSC6Q5RKV6 272 aaKnown RBP17.79■□□□□ 0.44
CCM2-216ENST00000488727 REEP3Q6NUK4 255 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 RAB2BQ8WUD1 216 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 HOXB13Q92826 284 aaPredicted RBP17.79■□□□□ 0.44
CCM2-216ENST00000488727 TP53INP1Q96A56 240 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 MOAP1Q96BY2 351 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 LMF1Q96S06 567 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 DUSP21Q9H596 190 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 EXD2Q9NVH0 621 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 PLA2G3Q9NZ20 509 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 LHX6Q9UPM6 363 aa17.79■□□□□ 0.44
CCM2-216ENST00000488727 PRAMEF25A6NGN4 478 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 WDPCPO95876 746 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ANXA8P13928 327 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 CALRP27797 417 aaKnown RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 MAP3K8P41279 467 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 LASP1Q14847 261 aaKnown RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 C6orf120Q7Z4R8 191 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ZNF605Q86T29 641 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 BPIFB6Q8NFQ5 453 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 OTUB1Q96FW1 271 aaPredicted RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 LCORQ96JN0 433 aaPredicted RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 HRASLS5Q96KN8 279 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 YIPF4Q9BSR8 244 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 LMF2Q9BU23 707 aaKnown RBP17.78■□□□□ 0.44
CCM2-216ENST00000488727 SERHL2Q9H4I8 314 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ANKRD10Q9NXR5 420 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 TESMINQ9Y4I5 508 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 CSAG2Q9Y5P2 127 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 FRG2CA6NGY1 282 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 ACP2P11117 423 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 DRD5P21918 477 aa17.78■□□□□ 0.44
CCM2-216ENST00000488727 SOX3P41225 446 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms