RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ACSM5Q6NUN0 579 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 ZNF544Q6NX49 715 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 ARMCX2Q7L311 632 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 OR2A12Q8NGT7 310 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 OR10T2Q8NGX3 314 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 IL1F10Q8WWZ1 152 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 RPL3LQ92901 407 aaKnown RBP2.33□□□□□ -2.04
CD46-215ENST00000488596 DTNBP1Q96EV8 351 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 OR5B2Q96R09 309 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 ZNF702PQ9H963 129 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 CGNQ9P2M7 1197 aaKnown RBP2.33□□□□□ -2.04
CD46-215ENST00000488596 SPRR3Q9UBC9 169 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 RIMS3Q9UJD0 308 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 SAMD4AQ9UPU9 718 aaKnown RBP2.33□□□□□ -2.04
CD46-215ENST00000488596 GSTK1Q9Y2Q3 226 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 KIF3AQ9Y496 699 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 FLVCR1Q9Y5Y0 555 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 SPACA6W5XKT8 324 aa2.33□□□□□ -2.04
CD46-215ENST00000488596 SF3B1O75533 1304 aaKnown RBP eCLIP2.33□□□□□ -2.042e-8■■■□□ 15.4
CD46-215ENST00000488596 CHD4Q14839 1912 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 PPIAL4CA0A0B4J2A2 164 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 ZFP92A6NM28 416 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 DHRS7CA6NNS2 312 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 K7ENP7 123 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 WWP2O00308 870 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CLDN5O00501 218 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CTAGE5O15320 804 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CABYRO75952 493 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CA1P00915 261 aaPredicted RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 HSPB1P04792 205 aaKnown RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 OR8U8P0C7N1 319 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 PPIAL4GP0DN37 164 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CLUP10909 449 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 HSPA5P11021 654 aaKnown RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 ZNF19P17023 458 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 SERPINA2P20848 420 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 ATP6V1C1P21283 382 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 HTR2AP28223 471 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 STX17P56962 302 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 ELP6Q0PNE2 266 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 SNTB2Q13425 540 aaKnown RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 CUL1Q13616 776 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 LAGE3Q14657 143 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 PRR4Q16378 134 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 NDUFA9Q16795 377 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 OR2B11Q5JQS5 317 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 RIPPLY2Q5TAB7 128 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 OR5M10Q6IEU7 315 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CXCL17Q6UXB2 119 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 MOB1BQ7L9L4 216 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 APTXQ7Z2E3 356 aaKnown RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 TMEM17Q86X19 198 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 LRRC43Q8N309 656 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 DENND6BQ8NEG7 585 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 OR2T34Q8NGX1 318 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 PNPT1Q8TCS8 783 aaKnown RBP2.32□□□□□ -2.04
CD46-215ENST00000488596 RSPH1Q8WYR4 309 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 OSTF1Q92882 214 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 MYLPFQ96A32 169 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 MS4A14Q96JA4 679 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CYP2S1Q96SQ9 504 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 SLC6A7Q99884 636 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 SLC30A2Q9BRI3 323 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 C19orf24Q9BVV8 132 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 TPPP3Q9BW30 176 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 TEX13BQ9BXU2 312 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 CHIAQ9BZP6 476 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 NMUR2Q9GZQ4 415 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 Q9H3A6 140 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 PPDPFQ9H3Y8 114 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 FANCFQ9NPI8 374 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 OR1A1Q9P1Q5 309 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 ABCG2Q9UNQ0 655 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 PDE10AQ9Y233 779 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 KIF25-AS1Q9Y6Z4 181 aa2.32□□□□□ -2.04
CD46-215ENST00000488596 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 A0A1B0GWJ7 208 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 EPOPA6NHQ4 379 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 SERF1AO75920 110 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 LYPD3O95274 346 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 PDHBP11177 359 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 PSMA2P25787 234 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 EPHX2P34913 555 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 CA8P35219 290 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 ACAA2P42765 397 aaKnown RBP2.31□□□□□ -2.04
CD46-215ENST00000488596 ACADVLP49748 655 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 PLA2G16P53816 162 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 OTUD4Q01804 1114 aaKnown RBP2.31□□□□□ -2.04
CD46-215ENST00000488596 SLC5A12Q1EHB4 618 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 GGTA1PQ4G0N0 100 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 ATF7IP2Q5U623 682 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 KCNIP4Q6PIL6 250 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 CES3Q6UWW8 571 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 FRA10AC1Q70Z53 315 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 ZDHHC21Q8IVQ6 265 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 SLC38A6Q8IZM9 456 aa2.31□□□□□ -2.04
CD46-215ENST00000488596 OR10H4Q8NGA5 316 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms