RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SF3B4Q15427 424 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■■□□□ 12.4
COL9A2-208ENST00000488463 ZNF141Q15928 474 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 MAPK14Q16539 360 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 PLPPR5Q32ZL2 321 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 FLYWCH1Q4VC44 716 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 RAET1LQ5VY80 246 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 MTERF4Q7Z6M4 381 aaKnown RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 FUNDC1Q8IVP5 155 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 DMRTC2Q8IXT2 367 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 GTPBP8Q8N3Z3 284 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 RAB8BQ92930 207 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 WNT2BQ93097 391 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 PIGQQ9BRB3 760 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 SLC35A5Q9BS91 424 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 SAP130Q9H0E3 1048 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 ZNF629Q9UEG4 869 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-208ENST00000488463 VDAC3Q9Y277 283 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 DTNAQ9Y4J8 743 aa12.81□□□□□ -0.36
COL9A2-208ENST00000488463 ETV2O00321 342 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 EFNA2O43921 213 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 KIAA0513O60268 411 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 TNFRSF21O75509 655 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 UGT2B17O75795 530 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 RCBTB2O95199 551 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 AK1P00568 194 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 IL6P05231 212 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 GSNP06396 782 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 CD1EP15812 388 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 ZNF17P17021 662 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 HOXB9P17482 250 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 POU3F2P20265 443 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 RCAN2Q14206 197 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 MAPK11Q15759 364 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 NDUFAF6Q330K2 333 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 TYW3Q6IPR3 259 aaKnown RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 MEX3BQ6ZN04 569 aaKnown RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 FRRS1Q6ZNA5 592 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 B4GALNT2Q8NHY0 566 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 PHOSPHO1Q8TCT1 267 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 ZG16BQ96DA0 208 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 ADGRG7Q96K78 797 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 MAGEB18Q96M61 343 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 PANX1Q96RD7 426 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 CCDC28BQ9BUN5 200 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 MKLN1Q9UL63 735 aa12.8□□□□□ -0.36
COL9A2-208ENST00000488463 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
COL9A2-208ENST00000488463 SYT5O00445 386 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 BCAS1O75363 584 aaPredicted RBP12.79□□□□□ -0.36
COL9A2-208ENST00000488463 STX11O75558 287 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 NTN1O95631 604 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 IL18BPO95998 194 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 IL2RAP01589 272 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ZCCHC18P0CG32 403 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 HPGDP15428 266 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 IL11P20809 199 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 BMP5P22003 454 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 CTSSP25774 331 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 KHKP50053 298 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
COL9A2-208ENST00000488463 AQP5P55064 265 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 LRRC74AQ0VAA2 488 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 TOMM34Q15785 309 aaPredicted RBP12.79□□□□□ -0.36
COL9A2-208ENST00000488463 CTU2Q2VPK5 515 aaKnown RBP12.79□□□□□ -0.36
COL9A2-208ENST00000488463 COX20Q5RI15 118 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 PDZK1Q5T2W1 519 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 MSANTD1Q6ZTZ1 278 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 RNF130Q86XS8 419 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 METTL25Q8N6Q8 603 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ZNF527Q8NB42 609 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 FAM71CQ8NEG0 241 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 XAGE5Q8WWM1 108 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 STON2Q8WXE9 905 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 FIG4Q92562 907 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 VPS33AQ96AX1 596 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ROPN1LQ96C74 230 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 ZBTB18Q99592 522 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
COL9A2-208ENST00000488463 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 FAM234BA2RU67 622 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 SERINC4A6NH21 518 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 H3BML4 177 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 DVL2O14641 736 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 TNFSF13O75888 250 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 AGR2O95994 175 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 NID1P14543 1247 aa12.78□□□□□ -0.36
COL9A2-208ENST00000488463 CHI3L1P36222 383 aaPredicted RBP12.78□□□□□ -0.36
COL9A2-208ENST00000488463 P2RX1P51575 399 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms