RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TSSK3Q96PN8 268 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 BBS4Q96RK4 519 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 TRIB1Q96RU8 372 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 TIMP4Q99727 224 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 ADI1Q9BV57 179 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 OSBPL11Q9BXB4 747 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 UGT2B28Q9BY64 529 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 RTN4RQ9BZR6 473 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 UBQLN3Q9H347 655 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 TUBB1Q9H4B7 451 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 GLIPR2Q9H4G4 154 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 EQTNQ9NQ60 294 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 SLC35C2Q9NQQ7 365 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 CNIH4Q9P003 139 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 SENP1Q9P0U3 644 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 FETUBQ9UGM5 382 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 BAIAP2L1Q9UHR4 511 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 RPH3AQ9Y2J0 694 aaPredicted RBP5.36□□□□□ -1.55
CDHR3-213ENST00000488386 CCL27Q9Y4X3 112 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 TEX15Q9BXT5 2789 aa5.36□□□□□ -1.55
CDHR3-213ENST00000488386 ITPR2Q14571 2701 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 NOTCH2Q04721 2471 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 GXYLT2A0PJZ3 443 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 WDR91A4D1P6 747 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 FRG2CA6NGY1 282 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 MYO1GB0I1T2 1018 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 UPK1AO00322 258 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 AZIN1O14977 448 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TSPAN2O60636 221 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 HCN1O60741 890 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 WDR1O75083 606 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 SEC22BO75396 215 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ERN1O75460 977 aaKnown RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 SKAP2O75563 359 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 LYPLA1O75608 230 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 HPNP05981 417 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 CYP4B1P13584 511 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 HK1P19367 917 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 DDCP20711 480 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 BMP5P22003 454 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 IL12BP29460 328 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 UQCRC1P31930 480 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PTGER4P35408 488 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PPICP45877 212 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 CCT5P48643 541 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TMED10P49755 219 aaKnown RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ZNF136P52737 540 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PRKAG1P54619 331 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PSG6Q00889 435 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 FOXF2Q12947 444 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 HEPACAMQ14CZ8 416 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 KIAA0040Q15053 153 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 CEBPEQ15744 281 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 CCDC153Q494R4 210 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ACSF3Q4G176 576 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 RFTN2Q52LD8 501 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 C10orf62Q5T681 223 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 LIPMQ5VYY2 423 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 CES4AQ5XG92 561 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TIGD3Q6B0B8 471 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 NOXRED1Q6NXP6 359 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 Q6ZSR9 355 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 NUP54Q7Z3B4 507 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 SZRD1Q7Z422 152 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 EXOC3L1Q86VI1 746 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TMEM200AQ86VY9 491 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TDRPQ86YL5 185 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 DDIASQ8IXT1 998 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 DND1Q8IYX4 353 aaKnown RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 EID3Q8N140 333 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 GBP7Q8N8V2 638 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 BANPQ8N9N5 519 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 C9orf106Q8NAJ2 232 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 OR1J4Q8NGS1 313 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 OR14L1PQ8NHC6 308 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ZNF675Q8TD23 568 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TCP10LQ8TDR4 215 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ASB5Q8WWX0 329 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PIK3R3Q92569 461 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ABTB1Q969K4 478 aaPredicted RBP5.35□□□□□ -1.55
CDHR3-213ENST00000488386 RAB24Q969Q5 203 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 WDYHV1Q96HA8 205 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 TMEM41AQ96HV5 264 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 APOPT1Q96IL0 206 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PKNOX2Q96KN3 472 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 PPP1R36Q96LQ0 422 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 VSTM2LQ96N03 204 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 COL21A1Q96P44 957 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 KLHDC3Q9BQ90 382 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 C1orf50Q9BV19 199 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 LIME1Q9H400 295 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 ACKR4Q9NPB9 350 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 KCNJ16Q9NPI9 418 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 MIEF1Q9NQG6 463 aa5.35□□□□□ -1.55
CDHR3-213ENST00000488386 GIMAP4Q9NUV9 329 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms