RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CSTAP01040 98 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 NPPAP01160 153 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 ABOP16442 354 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 HK1P19367 917 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 SRD5A2P31213 254 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 PCGF2P35227 344 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 GZMMP51124 257 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 ART3Q13508 389 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 ELOAQ14241 798 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 GNA13Q14344 377 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 SLC10A1Q14973 349 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 C3AR1Q16581 482 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 KRTCAP3Q53RY4 240 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 MRPL2Q5T653 305 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 RAET1LQ5VY80 246 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 HACD2Q6Y1H2 254 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 EIF3MQ7L2H7 374 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 MTERF4Q7Z6M4 381 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 SERPINA11Q86U17 422 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 IFNEQ86WN2 208 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 CALHM3Q86XJ0 350 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 PEX5LQ8IYB4 626 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 C11orf65Q8NCR3 313 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 FAM71CQ8NEG0 241 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 OR52P1PQ8NH57 321 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 B4GALNT2Q8NHY0 566 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 CNOT9Q92600 299 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 NPAS1Q99742 590 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 BCL2L10Q9HD36 194 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 CMTM6Q9NX76 183 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 QPCTLQ9NXS2 382 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 DNAJB12Q9NXW2 375 aaKnown RBP10.03□□□□□ -0.8
UBE4B-210ENST00000488228 TAS2R10Q9NYW0 307 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 ICAM5Q9UMF0 924 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 ANGPT4Q9Y264 503 aa10.03□□□□□ -0.8
UBE4B-210ENST00000488228 A0A0G2JPF8 293 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 FAM220BPB1ANY3 271 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 HNRNPCL2B2RXH8 293 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 HNRNPCL3B7ZW38 293 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 NPIPA2E9PIF3 369 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 NPIPA3F8WFD2 350 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 GTPBP1O00178 669 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 AQP7O14520 342 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 AP3D1O14617 1153 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ZNF264O43296 627 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SLC19A2O60779 497 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 HNRNPCL1O60812 293 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ADAM11O75078 769 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 WISP1O95388 367 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PGM3O95394 542 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 NUDT14O95848 222 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 OPN1SWP03999 348 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 DBIP07108 87 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 HNRNPCL4P0DMR1 293 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 NID1P14543 1247 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PGM1P36871 562 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ZNF41P51814 821 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 DSCR4P56555 118 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PSME3P61289 254 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 KCNJ10P78508 379 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 FOXF1Q12946 379 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 GANABQ14697 944 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 KRT72Q14CN4 511 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 TOMM34Q15785 309 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 VMACQ2NL98 169 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 EIF2S3LQ2VIR3 472 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 LIN52Q52LA3 116 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PRAMEF8Q5VWM4 474 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PRAMEF7Q5VXH5 474 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ARHGAP11AQ6P4F7 1023 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ARPINQ7Z6K5 226 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 CD163Q86VB7 1156 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 COMTD1Q86VU5 262 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SLC15A3Q8IY34 581 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 HIPK4Q8NE63 616 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 NEIL3Q8TAT5 605 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ZNF524Q96C55 264 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 REXO5Q96IC2 774 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SFXN2Q96NB2 322 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ECSITQ9BQ95 431 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 RSPO3Q9BXY4 272 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 PTGES2Q9H7Z7 377 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 MTHFD2LQ9H903 347 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 ACKR4Q9NPB9 350 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 MED17Q9NVC6 651 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 RLIMQ9NVW2 624 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SUCOQ9UBS9 1254 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 TINAGQ9UJW2 476 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 OSGIN2Q9Y236 505 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SLC35A3Q9Y2D2 325 aa10.02□□□□□ -0.81
UBE4B-210ENST00000488228 SPTAN1Q13813 2472 aaKnown RBP10.02□□□□□ -0.81
UBE4B-210ENST00000488228 A0A1B0GVC2 190 aa10.01□□□□□ -0.81
UBE4B-210ENST00000488228 FRS3O43559 492 aa10.01□□□□□ -0.81
UBE4B-210ENST00000488228 ZIC3O60481 467 aa10.01□□□□□ -0.81
UBE4B-210ENST00000488228 HCN1O60741 890 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms