RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 NPIPA8P0DM63 369 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 IGHV4-38-2P0DP08 117 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MCF2P10911 925 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 CCNB1P14635 433 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MSR1P21757 451 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 CDH5P33151 784 aaPredicted RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 ACLYP53396 1101 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 DVL1P1P54792 670 aaPredicted RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 PEX3P56589 373 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ABCE1P61221 599 aaKnown RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 CSNK2BP67870 215 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 GAGE5Q13069 117 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 GAGE6Q13070 117 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SLAQ13239 276 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SNTA1Q13424 505 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ITIH4Q14624 930 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 PPP1R3AQ16821 1122 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SNAI3Q3KNW1 292 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 TEX44Q53QW1 395 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SCYL2Q6P3W7 929 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 NIPA1Q7RTP0 329 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 LINC00523Q86TU6 105 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MICU2Q8IYU8 434 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 TRIML2Q8N7C3 387 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 FAM86B1Q8N7N1 296 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 OR2T11Q8NH01 316 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 RHEBL1Q8TAI7 183 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ACMSDQ8TDX5 336 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MITD1Q8WV92 249 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MAIP1Q8WWC4 291 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ASZ1Q8WWH4 475 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ST6GAL2Q96JF0 529 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 TUBA1CQ9BQE3 449 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SLC30A2Q9BRI3 323 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SF3B5Q9BWJ5 86 aaKnown RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 PINK1Q9BXM7 581 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ADGRL4Q9HBW9 690 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 INPP5EQ9NRR6 644 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 MAN2C1Q9NTJ4 1040 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 C20orf96Q9NUD7 363 aaPredicted RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 TAS2R16Q9NYV7 291 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 UBAP1Q9NZ09 502 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 EIF3KQ9UBQ5 218 aaKnown RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 IKZF2Q9UKS7 526 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 NPIPA1Q9UND3 350 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 GMEB1Q9Y692 573 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 SELENOKQ9Y6D0 94 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 BZW2Q9Y6E2 419 aaKnown RBP3.05□□□□□ -1.92
HFM1-208ENST00000488023 SNED1Q8TER0 1413 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 METP08581 1390 aa3.05□□□□□ -1.92
HFM1-208ENST00000488023 IGHV4OR15-8A0A075B7B6 117 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 A0A1W2PNV4 684 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 A0A1W2PPV4 95 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 ZNF724A8MTY0 619 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 PSMD11O00231 422 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 ZNF195O14628 629 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 BCKDKO14874 412 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 MSH4O15457 936 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 CLDN9O95484 217 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 POP4O95707 220 aaKnown RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 SAA4P35542 130 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 RPL4P36578 427 aaKnown RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 RPL13AP40429 203 aaKnown RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 ZFP36L2P47974 494 aaKnown RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 CDK16Q00536 496 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 KLRB1Q12918 225 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 XRCC4Q13426 336 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 RAB35Q15286 201 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 BEX5Q5H9J7 111 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 TECRLQ5HYJ1 363 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 MLIPQ5VWP3 458 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 WSCD1Q658N2 575 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 SLC25A25Q6KCM7 469 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 ENPP6Q6UWR7 440 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 PRSS48Q7RTY5 328 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 TSEN54Q7Z6J9 526 aaKnown RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 SCD5Q86SK9 330 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 TPRA1Q86W33 373 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 CATSPERDQ86XM0 798 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 SLC35F2Q8IXU6 374 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 GABRG1Q8N1C3 465 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 OR4A15Q8NGL6 344 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 OR1K1Q8NGR3 316 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 MAGEE2Q8TD90 523 aaPredicted RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 ARNTL2Q8WYA1 636 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 RAB1CQ92928 201 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 CERS2Q96G23 380 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 SDSLQ96GA7 329 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 ZNF479Q96JC4 524 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 MBOAT4Q96T53 435 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 NKX3-1Q99801 234 aaPredicted RBP3.04□□□□□ -1.92
HFM1-208ENST00000488023 TMEM204Q9BSN7 226 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 GPR174Q9BXC1 333 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 ANKRD19PQ9H560 264 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 Q9HAA7 133 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 EBF2Q9HAK2 575 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 POPDC2Q9HBU9 364 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 SPACA1Q9HBV2 294 aa3.04□□□□□ -1.92
HFM1-208ENST00000488023 TREM1Q9NP99 234 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms