RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FAM71CQ8NEG0 241 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 OR5M3Q8NGP4 307 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 OR5W2Q8NH69 310 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 GRHL3Q8TE85 626 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 TMEM234Q8WY98 164 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 TMEM41AQ96HV5 264 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 SEPHS2Q99611 448 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF559Q9BR84 538 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 BDH2Q9BUT1 245 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDLBP-242ENST00000488013 DCLRE1BQ9H816 532 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 TMEM27Q9HBJ8 222 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 S100A14Q9HCY8 104 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 SELENONQ9NZV5 590 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 PPP4R1LQ9P1A2 415 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 KCNE5Q9UJ90 142 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 CNOT11Q9UKZ1 510 aaKnown RBP10.11□□□□□ -0.79
HDLBP-242ENST00000488013 BOKQ9UMX3 212 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-242ENST00000488013 WIF1Q9Y5W5 379 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ENPP4Q9Y6X5 453 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 ACACAQ13085 2346 aa10.11□□□□□ -0.79
HDLBP-242ENST00000488013 A0A087WZY1 265 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 MASP2O00187 686 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 MAN1A2O60476 641 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 LINGO3P0C6S8 592 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 UBTFL6P0CB48 400 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 SFTPCP11686 197 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 PGCP20142 388 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 HTR3AP46098 478 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 MASP1P48740 699 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 P2RX1P51575 399 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 MAP2K6P52564 334 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ARHGDIAP52565 204 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 CBFBQ13951 182 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 GANABQ14697 944 aaKnown RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 SWT1Q5T5J6 900 aaKnown RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 FNDC7Q5VTL7 733 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 SLC25A25Q6KCM7 469 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF613Q6PF04 617 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ENPP6Q6UWR7 440 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 VTCN1Q7Z7D3 282 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 MARCH3Q86UD3 253 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ZDHHC21Q8IVQ6 265 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 CLIP4Q8N3C7 705 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 LSMEM1Q8N8F7 131 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 FAM98AQ8NCA5 519 aaKnown RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 GPR32P1Q8NGA4 272 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 B4GALNT2Q8NHY0 566 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 DNAJA4Q8WW22 397 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ARSGQ96EG1 525 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 NODALQ96S42 347 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 FAM173AQ9BQD7 235 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 OSBPL10Q9BXB5 764 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ADNPQ9H2P0 1102 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 ANKRD19PQ9H560 264 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 DNAJB12Q9NXW2 375 aaKnown RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 C6orf203Q9P0P8 240 aaPredicted RBP10.1□□□□□ -0.79
HDLBP-242ENST00000488013 B4GALT7Q9UBV7 327 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 CROCCQ5TZA2 2017 aa10.1□□□□□ -0.79
HDLBP-242ENST00000488013 CACNA1BQ00975 2339 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 NPIPA5A0A0B4J1W7 369 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 HTR3EA5X5Y0 456 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 TMEM229AB2RXF0 380 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 NPIPA7E9PJI5 369 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 GNGT2O14610 69 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 SCO2O43819 266 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 MGRN1O60291 552 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 TPST1O60507 370 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 CBR3O75828 277 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 NEURL1O76050 574 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 OR5F1O95221 314 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 LDLRP01130 860 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 SEMG1P04279 462 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 NPIPA8P0DM63 369 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 FKBP2P26885 142 aaKnown RBP10.09□□□□□ -0.79
HDLBP-242ENST00000488013 ITPKBP27987 946 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 EIF1P41567 113 aaKnown RBP10.09□□□□□ -0.79
HDLBP-242ENST00000488013 TNFSF10P50591 281 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 GAS1P54826 345 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 CXADRP78310 365 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 ST3GAL3Q11203 375 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 SKP2Q13309 424 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 TBR1Q16650 682 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 TIGD3Q6B0B8 471 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 OLIG3Q7RTU3 272 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 PLCZ1Q86YW0 608 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 LINC00471Q8N535 108 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 PIK3C3Q8NEB9 887 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 OR4K17Q8NGC6 315 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 DUSP19Q8WTR2 217 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 MPP4Q96JB8 637 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 C7orf34Q96L11 122 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF597Q96LX8 424 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 PRRC1Q96M27 445 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 ZNF300Q96RE9 604 aaPredicted RBP10.09□□□□□ -0.79
HDLBP-242ENST00000488013 PIP5K1AQ99755 562 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 C12orf10Q9HB07 376 aa10.09□□□□□ -0.79
HDLBP-242ENST00000488013 RLIMQ9NVW2 624 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms