RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 SPATA46Q5T0L3 261 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 DCST2Q5T1A1 773 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 NEK5Q6P3R8 708 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 SCYL2Q6P3W7 929 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 STAC2Q6ZMT1 411 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 LPCAT2Q7L5N7 544 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 HSD17B13Q7Z5P4 300 aaPredicted RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 TMEM110Q86TL2 294 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 ERI1Q8IV48 349 aaKnown RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 ZNF540Q8NDQ6 660 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 ANKRD20A12PQ8NF67 263 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 ANKRD49Q8WVL7 239 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 MRPL38Q96DV4 380 aaKnown RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 NOL4LQ96MY1 436 aaPredicted RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 IL4I1Q96RQ9 567 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 NMNAT2Q9BZQ4 307 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 HOOK1Q9UJC3 728 aaKnown RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 EIF3LQ9Y262 564 aaKnown RBP2.74□□□□□ -1.97
TTC3-220ENST00000487711 DEPDC5O75140 1603 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 ERBINQ96RT1 1412 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 ANKRD50Q9ULJ7 1429 aa2.74□□□□□ -1.97
TTC3-220ENST00000487711 BCORL1Q5H9F3 1711 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 CDC42BPBQ9Y5S2 1711 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 PRDM15P57071 1507 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 DUOX2Q9NRD8 1548 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 KDM6BO15054 1643 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 RGSL1A5PLK6 1076 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ZSCAN5BA6NJL1 495 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 B4DXG7 233 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 PDXKO00764 312 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 SMPD2O60906 423 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 HMMRO75330 724 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 LYPLA1O75608 230 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 SCRG1O75711 98 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 STSP08842 583 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 H2AFXP16104 143 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 ADORA2BP29275 332 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ZNF133P52736 654 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 EFNA3P52797 238 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ATXN3P54252 364 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 POLR2FP61218 127 aaKnown RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 OSTNP61366 133 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 RND3P61587 244 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 GNB2P62879 340 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 KLHL30Q0D2K2 578 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 FUT7Q11130 342 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 PSG7Q13046 419 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ZNF154Q13106 437 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ORC2Q13416 577 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 GAMTQ14353 236 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 INAQ16352 499 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 C12orf60Q5U649 245 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ZNF530Q6P9A1 599 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 CXCL17Q6UXB2 119 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 LRRC70Q7Z2Q7 622 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 KDM8Q8N371 416 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 RNF148Q8N7C7 305 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 OR56B1Q8NGI3 324 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ZNF606Q8WXB4 792 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ARNTL2Q8WYA1 636 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 NEIL2Q969S2 332 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ELSPBP1Q96BH3 223 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 UPRTQ96BW1 309 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 CCSER1Q9C0I3 900 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 COMMD4Q9H0A8 199 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 GMPPBQ9Y5P6 360 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.73□□□□□ -1.97
TTC3-220ENST00000487711 RTEL1-TNFRSF6BF6WH68 1400 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 C9orf84Q5VXU9 1444 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 SAMD9LQ8IVG5 1584 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 CFAP74Q9C0B2 1584 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 CLASP1Q7Z460 1538 aa2.73□□□□□ -1.97
TTC3-220ENST00000487711 ARHGAP23Q9P227 1491 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 TRPM1Q7Z4N2 1603 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 WASHC1A8K0Z3 465 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 CHD1O14646 1710 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 CABYRO75952 493 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 HEXBP07686 556 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 BCKDHAP12694 445 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 ETS1P14921 441 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 VDAC1P21796 283 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 RABIFP47224 123 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 RPL29P47914 159 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 NOVA1P51513 510 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 RPL8P62917 257 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 VLDLRP98155 873 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 OTUD4Q01804 1114 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 EXOSC2Q13868 293 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 ELAVL3Q14576 367 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 HERPUD1Q15011 391 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 ANKDD1AQ495B1 522 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 CELF3Q5SZQ8 465 aaKnown RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 OR8G2PQ6IF36 304 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 ZCCHC12Q6PEW1 402 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 HSD11B1LQ7Z5J1 315 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 RNF175Q8N4F7 328 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 ZSCAN4Q8NAM6 433 aaPredicted RBP2.72□□□□□ -1.97
TTC3-220ENST00000487711 STKLD1Q8NE28 680 aa2.72□□□□□ -1.97
TTC3-220ENST00000487711 BBS1Q8NFJ9 593 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms