RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 TSPAN31Q12999 210 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 MAD2L1BPQ15013 274 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 PTGES3Q15185 160 aaKnown RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 CCDC157Q569K6 752 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 FNDC7Q5VTL7 733 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 C6orf15Q6UXA7 325 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 GALNT6Q8NCL4 622 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 PMEPA1Q969W9 287 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 CCNL2Q96S94 520 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 ADOQ96SZ5 270 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 B3GNT4Q9C0J1 378 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 AKIRIN1Q9H9L7 192 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-222ENST00000487647 POLR1BQ9H9Y6 1135 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 PARD6AQ9NPB6 346 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 PCDHGA6Q9Y5G7 932 aa13.54□□□□□ -0.24
FGFR1-222ENST00000487647 DPPA5A6NC42 116 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 OR6C70A6NIJ9 312 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ZAR1LA6NP61 321 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 CHP2O43745 196 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 KLF7O75840 302 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 SMNDC1O75940 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ZFAND5O76080 213 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 THY1P04216 161 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RAB40ALP0C0E4 278 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ITIH1P19827 911 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TGM1P22735 817 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 CRHBPP24387 322 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 FPR3P25089 353 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ABCD3P28288 659 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NBL1P41271 181 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 STAT5AP42229 794 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RBM34P42696 430 aaKnown RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 OMPP47874 163 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 GSSP48637 474 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 COPZ1P61923 177 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 EFR3AQ14156 821 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 MEP1AQ16819 746 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 CTU2Q2VPK5 515 aaKnown RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ULK3Q6PHR2 472 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 CACTIN-AS1Q8N1I8 211 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 WDR36Q8NI36 951 aaKnown RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TRUB1Q8WWH5 349 aaKnown RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 OMA1Q96E52 524 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 LMF1Q96S06 567 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 PRSS27Q9BQR3 290 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TOR4AQ9NXH8 423 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NDUFA13Q9P0J0 144 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NTNG1Q9Y2I2 539 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 PTRH2Q9Y3E5 179 aaKnown RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NINQ8N4C6 2090 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 DMDP11532 3685 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 HTR3EA5X5Y0 456 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ALG1L2C9J202 215 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 LYPD3O95274 346 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 DLGAP3O95886 979 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 UBL4AP11441 157 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ELK4P28324 431 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ETV5P41161 510 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 FOLR3P41439 243 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 SLC6A8P48029 635 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 EXT1Q16394 746 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 FAM199XQ6PEV8 388 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RASSF6Q6ZTQ3 369 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 PRICKLE2Q7Z3G6 844 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 CCDC71Q8IV32 467 aaPredicted RBP13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TMEM239Q8WW34 195 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NACC2Q96BF6 587 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 SPRY4Q9C004 299 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 FAM192AQ9GZU8 254 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 LAT2Q9GZY6 243 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 ZNF700Q9H0M5 742 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 SCN3BQ9NY72 215 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RPS6KB2Q9UBS0 482 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 PISDQ9UG56 409 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TMEM5Q9Y2B1 443 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 TPRKBQ9Y3C4 175 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 VPS13AQ96RL7 3174 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 RALGAPA1Q6GYQ0 2036 aa13.53□□□□□ -0.24
FGFR1-222ENST00000487647 MYO15AQ9UKN7 3530 aa13.52□□□□□ -0.25
FGFR1-222ENST00000487647 TRBV11-1A0A0K0K1C0 115 aa13.52□□□□□ -0.25
FGFR1-222ENST00000487647 A0A1B0GWA3 101 aa13.52□□□□□ -0.25
FGFR1-222ENST00000487647 GTPBP1O00178 669 aaKnown RBP13.52□□□□□ -0.25
FGFR1-222ENST00000487647 ZNF264O43296 627 aa13.52□□□□□ -0.25
FGFR1-222ENST00000487647 KLF4O43474 513 aa13.52□□□□□ -0.25
FGFR1-222ENST00000487647 EIF4E2O60573 245 aaKnown RBP13.52□□□□□ -0.25
FGFR1-222ENST00000487647 MRPS14O60783 128 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms