RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SKP2Q13309 424 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 LRRC23Q53EV4 343 aaPredicted RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 WIPI1Q5MNZ9 446 aaPredicted RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 CBLN3Q6UW01 205 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 ARMC8Q8IUR7 673 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 SIAH3Q8IW03 269 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 CMIPQ8IY22 773 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 FADS6Q8N9I5 356 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 TOR1AIP2Q8NFQ8 470 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 SLC26A7Q8TE54 656 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 ARSGQ96EG1 525 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 GPR137Q96N19 417 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 SLX1AQ9BQ83 275 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 SLC6A15Q9H2J7 730 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 UBQLN3Q9H347 655 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 ZDHHC11Q9H8X9 412 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 QPCTLQ9NXS2 382 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 TMEM181Q9P2C4 612 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 GMPR2Q9P2T1 348 aaKnown RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 VDAC3Q9Y277 283 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 RPH3AQ9Y2J0 694 aaPredicted RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 IFT52Q9Y366 437 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 LIPGQ9Y5X9 500 aa11.61□□□□□ -0.55
PRDM2-208ENST00000487453 GPC6Q9Y625 555 aaPredicted RBP11.61□□□□□ -0.55
PRDM2-208ENST00000487453 IGLV3-32A0A0A0MS00 114 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 TRGV5A0A0B4J1U4 118 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 PRORSD1PA6NEY8 169 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 EIF4E2O60573 245 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 DNAJA2O60884 412 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 BCAS1O75363 584 aaPredicted RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 HK1P19367 917 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 MSX1P28360 303 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SRD5A2P31213 254 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 CPOXP36551 454 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 PGM1P36871 562 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SUMO3P55854 103 aaPredicted RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 DSCR4P56555 118 aaPredicted RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 PCBP3P57721 371 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 CBFBQ13951 182 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 VEZF1Q14119 521 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 GANABQ14697 944 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SLC10A1Q14973 349 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 EIPR1Q53HC9 387 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SAMD4BQ5PRF9 694 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 RNF220Q5VTB9 566 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 ZNF324BQ6AW86 544 aaPredicted RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 GFRALQ6UXV0 394 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 PATL1Q86TB9 770 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 YRDCQ86U90 279 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SPPL2CQ8IUH8 684 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 GHDCQ8N2G8 530 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SMYD1Q8NB12 490 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 FAM156AQ8NDB6 213 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 FAM83FQ8NEG4 500 aaPredicted RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 TNIP2Q8NFZ5 429 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 FIG4Q92562 907 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 CNOT9Q92600 299 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 C1GALT1C1Q96EU7 318 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 CDRT15Q96T59 188 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
PRDM2-208ENST00000487453 TAS2R10Q9NYW0 307 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 SLC13A4Q9UKG4 626 aa11.6□□□□□ -0.55
PRDM2-208ENST00000487453 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ANKUB1A6NFN9 424 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 GYG2O15488 501 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 WISP2O76076 250 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 HPNP05981 417 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 EDN3P14138 238 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 PRKAR1BP31321 381 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 RYKP34925 604 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 GCKP35557 465 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ADH7P40394 386 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 EEF1A1P68104 462 aaKnown RBP11.59□□□□□ -0.55
PRDM2-208ENST00000487453 PLAURQ03405 335 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ELOAQ14241 798 aaKnown RBP11.59□□□□□ -0.55
PRDM2-208ENST00000487453 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ARSKQ6UWY0 536 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 FAM71CQ8NEG0 241 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 OR5W2Q8NH69 310 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ZNF563Q8TA94 476 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 BARD1Q99728 777 aaKnown RBP11.59□□□□□ -0.55
PRDM2-208ENST00000487453 KLHDC3Q9BQ90 382 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 OR2B2Q9GZK3 357 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 EXOSC3Q9NQT5 275 aaKnown RBP11.59□□□□□ -0.55
PRDM2-208ENST00000487453 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ICAM5Q9UMF0 924 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 ATRXP46100 2492 aa11.59□□□□□ -0.55
PRDM2-208ENST00000487453 A0A1B0GTH9 108 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 SHISA8B8ZZ34 492 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 M0QX08 132 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 CXCR6O00574 342 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 AP3D1O14617 1153 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 GMNNO75496 209 aa11.58□□□□□ -0.56
PRDM2-208ENST00000487453 GCM2O75603 506 aaPredicted RBP11.58□□□□□ -0.56
PRDM2-208ENST00000487453 MFN2O95140 757 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms