RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C18orf63Q68DL7 685 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 Q6ZPA2 131 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 C1orf229Q6ZS94 237 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 BHLHA15Q7RTS1 189 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 CENPLQ8N0S6 344 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 KRT78Q8N1N4 520 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 OR7G1Q8NGA0 311 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 CALML6Q8TD86 181 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 ADGRG7Q96K78 797 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 EBF4Q9BQW3 602 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 GATA5Q9BWX5 397 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 TRIM54Q9BYV2 358 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 MMP27Q9H306 513 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 C12orf49Q9H741 205 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 PNPOQ9NVS9 261 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 TAS2R1Q9NYW7 299 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 TAGLN3Q9UI15 199 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 TRMT6Q9UJA5 497 aaKnown RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 CORO1CQ9ULV4 474 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 STK38LQ9Y2H1 464 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 ACOT9Q9Y305 439 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 COL7A1Q02388 2944 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 C17orf51A8MQB3 221 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 B4DSR2 109 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 H3BML4 177 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 ACOX3O15254 700 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PRAMEF4O60810 478 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PEX11AO75192 247 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 SNUPNO95149 360 aaKnown RBP10.25□□□□□ -0.77
TRIM56-204ENST00000487252 KLHL2O95198 593 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PGM3O95394 542 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 ADAP00813 363 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 STMN1P16949 149 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 CCNG1P51959 295 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 RAP1GDS1P52306 607 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TAS2R39P59534 338 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PLCXD2Q0VAA5 305 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 DLG1Q12959 904 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 SLAMF1Q13291 335 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 NNATQ16517 81 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PPP1R3AQ16821 1122 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TMEM44Q2T9K0 475 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TSNAXIP1Q2TAA8 658 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TUSC1Q2TAM9 212 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TIMM23BQ5SRD1 257 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PRAMEF9Q5VWM5 478 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 LIPMQ5VYY2 423 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 SLC22A25Q6T423 547 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 EPGNQ6UW88 154 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TMEM108Q6UXF1 575 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 GPR180Q86V85 440 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 GLCCI1Q86VQ1 547 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 TMCO6Q96DC7 493 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 LINGO1Q96FE5 620 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 SLC35A4Q96G79 324 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 INPP5KQ9BT40 448 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 MS4A8Q9BY19 250 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 PRRG4Q9BZD6 226 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 C1orf21Q9H246 121 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 EHD1Q9H4M9 534 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 ZBTB26Q9HCK0 441 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 ACSS1Q9NUB1 689 aaPredicted RBP10.25□□□□□ -0.77
TRIM56-204ENST00000487252 EHD3Q9NZN3 535 aa10.25□□□□□ -0.77
TRIM56-204ENST00000487252 MARCOQ9UEW3 520 aaPredicted RBP10.25□□□□□ -0.77
TRIM56-204ENST00000487252 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.25□□□□□ -0.77
TRIM56-204ENST00000487252 ZNF814B7Z6K7 855 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 TO15178 435 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 PHGDHO43175 533 aaKnown RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 NPHS1O60500 1241 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 STAMBPO95630 424 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 NTN1O95631 604 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 HSPA4LO95757 839 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 KITP10721 976 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 HK1P19367 917 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 PTAFRP25105 342 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 CD40P25942 277 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 PRDX6P30041 224 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 APOBEC3AP31941 199 aaPredicted RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 SERPINB5P36952 375 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 DNAJB13P59910 316 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 GANABQ14697 944 aaKnown RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 GLYR1Q49A26 553 aaPredicted RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 TMEM35AQ53FP2 167 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 METTL21CQ5VZV1 264 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 P2RY8Q86VZ1 359 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 TEX9Q8N6V9 391 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 OR2M3Q8NG83 312 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 OR52B6Q8NGF0 335 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 OR10D3Q8NH80 312 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 WDR34Q96EX3 536 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 TRMOQ9BU70 441 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 DENND2DQ9H6A0 471 aaPredicted RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 HIF1ANQ9NWT6 349 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 PAQR5Q9NXK6 330 aaPredicted RBP10.24□□□□□ -0.77
TRIM56-204ENST00000487252 GPRC5BQ9NZH0 403 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 POU2F3Q9UKI9 436 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 RAP2CQ9Y3L5 183 aa10.24□□□□□ -0.77
TRIM56-204ENST00000487252 NPIPA5A0A0B4J1W7 369 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 A0A1W2PS29 197 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms