RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FBXL2Q9UKC9 423 aa17.63■□□□□ 0.41
PCOLCE-208ENST00000487172 ICAM5Q9UMF0 924 aa17.63■□□□□ 0.41
PCOLCE-208ENST00000487172 NCKAP5O14513 1909 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ZFYVE26Q68DK2 2539 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 NPIPA5E9PKD4 350 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 HCRTR2O43614 444 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 MFN2O95140 757 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 EDN3P14138 238 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 EEF1A1P68104 462 aaKnown RBP17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ZNF117Q03924 483 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 BNIP1Q12981 228 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ZNF311Q5JNZ3 666 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 CBLN3Q6UW01 205 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 RINLQ6ZS11 566 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 IFNEQ86WN2 208 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 VRK2Q86Y07 508 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 GRAMD2AQ8IUY3 354 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ARHGAP24Q8N264 748 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 BHLHE22Q8NFJ8 381 aaPredicted RBP17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 TNIP2Q8NFZ5 429 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ARSGQ96EG1 525 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 CDRT15Q96T59 188 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 OR2B2Q9GZK3 357 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ARMC7Q9H6L4 198 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 TAS2R1Q9NYW7 299 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ADA2Q9NZK5 511 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 PRDM4Q9UKN5 801 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 NPIPA1Q9UND3 350 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 USP22Q9UPT9 525 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 ZNF443Q9Y2A4 671 aaPredicted RBP17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 CARD8Q9Y2G2 431 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 PCNX3Q9H6A9 2034 aa17.62■□□□□ 0.41
PCOLCE-208ENST00000487172 SPTA1P02549 2419 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 PRORSD1PA6NEY8 169 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 ANKUB1A6NFN9 424 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 CLDN24A6NM45 220 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 M0QX08 132 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 WISP2O76076 250 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 HSD17B1P14061 328 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 DPP4P27487 766 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 PRKAR1BP31321 381 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 PLAURQ03405 335 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 SKP2Q13309 424 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 GLYR1Q49A26 553 aaPredicted RBP17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 MRPL2Q5T653 305 aaKnown RBP17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 DHRS4L2Q6PKH6 230 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 ZNF836Q6ZNA1 936 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 HMGN2P46Q86SG4 172 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 SLC35B4Q969S0 331 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 C1GALT1C1Q96EU7 318 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 SH3YL1Q96HL8 342 aaPredicted RBP17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 DEFB127Q9H1M4 99 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 CD300AQ9UGN4 299 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 CHST2Q9Y4C5 530 aa17.61■□□□□ 0.41
PCOLCE-208ENST00000487172 A0A087WZY1 265 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 A0A1B0GVC2 190 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 CDHR4A6H8M9 788 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 OIP5O43482 229 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 SUSD5O60279 629 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 ZIC3O60481 467 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 HCN1O60741 890 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 TRAPPC6AO75865 159 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 ATP5HO75947 161 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 CELA3AP09093 270 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 HTR1EP28566 365 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 AQP1P29972 269 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 RNF144AP50876 292 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 TLE1Q04724 770 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 SAMD4BQ5PRF9 694 aaKnown RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 TRILQ7L0X0 811 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 PRICKLE2Q7Z3G6 844 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 GHDCQ8N2G8 530 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 ST6GALNAC3Q8NDV1 305 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 FAM83FQ8NEG4 500 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 OR5W2Q8NH69 310 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 RASSF5Q8WWW0 418 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 CNOT9Q92600 299 aaKnown RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 MIB2Q96AX9 1013 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 KCTD14Q9BQ13 255 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 PINK1Q9BXM7 581 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 RSPO3Q9BXY4 272 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 TSPAN10Q9H1Z9 355 aaPredicted RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 EVA1AQ9H8M9 152 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 DNAJB12Q9NXW2 375 aaKnown RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 GMPR2Q9P2T1 348 aaKnown RBP17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 SEC14L3Q9UDX4 400 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 SHANK1Q9Y566 2161 aa17.6■□□□□ 0.41
PCOLCE-208ENST00000487172 TRGV5A0A0B4J1U4 118 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 UBTFL6P0CB48 400 aaPredicted RBP17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 KDELR2P33947 212 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 CBFBQ13951 182 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 FXNQ16595 210 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 ARMC8Q8IUR7 673 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 ZNF440Q8IYI8 595 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 NEIL3Q8TAT5 605 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 GPR119Q8TDV5 335 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 SLC7A6OSQ96CW6 309 aaPredicted RBP17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 DKKL1Q9UK85 242 aa17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 PRPF19Q9UMS4 504 aaKnown RBP17.59■□□□□ 0.41
PCOLCE-208ENST00000487172 CXCR6O00574 342 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms