RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.25□□□□□ -0.93
NEK4-204ENST00000487068 ARSKQ6UWY0 536 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 HMGN2P46Q86SG4 172 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 GRAMD2AQ8IUY3 354 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 ZNF619Q8N2I2 560 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 CHDHQ8NE62 594 aaPredicted RBP9.25□□□□□ -0.93
NEK4-204ENST00000487068 TOR1AIP2Q8NFQ8 470 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 MIPOL1Q8TD10 442 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 NTNG2Q96CW9 530 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 AURKBQ96GD4 344 aaPredicted RBP9.25□□□□□ -0.93
NEK4-204ENST00000487068 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 ZNF350Q9GZX5 532 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 RABEP2Q9H5N1 569 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 SLC6A13Q9NSD5 602 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 P2RX2Q9UBL9 471 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.25□□□□□ -0.93
NEK4-204ENST00000487068 CARD8Q9Y2G2 431 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 PKDREJQ9NTG1 2253 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 CELSR2Q9HCU4 2923 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 ABCA12Q86UK0 2595 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 A0A087WZY1 265 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 A0A0G2JNJ9 132 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 NKX2-6A6NCS4 301 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 CLCA1A8K7I4 914 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 HMGN4O00479 90 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ANGPT2O15123 496 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ZNF264O43296 627 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 HNRNPRO43390 633 aaKnown RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 ATP8B1O43520 1251 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 KIAA0513O60268 411 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 FCMRO60667 390 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 C1QCP02747 245 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ETFAP13804 333 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 COX6B1P14854 86 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ZNF17P17021 662 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 BMP5P22003 454 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 MSX1P28360 303 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ZFP36L2P47974 494 aaKnown RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 LHX2P50458 406 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ATP4BP51164 291 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 P2RX1P51575 399 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ARFIP2P53365 341 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 DSTNP60981 165 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 RPS3AP61247 264 aaKnown RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 IRX1P78414 480 aaPredicted RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 TXNL4AP83876 142 aaKnown RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 FUT5Q11128 374 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 FOXF1Q12946 379 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 SYPL1Q16563 259 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 SGCBQ16585 318 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 COX20Q5RI15 118 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 RTL6Q6ICC9 239 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ZFP90Q8TF47 636 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 ZBTB8AQ96BR9 441 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 RNF145Q96MT1 663 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 TUBA1CQ9BQE3 449 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 NMUR2Q9GZQ4 415 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 RAD21L1Q9H4I0 556 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 TMEM185BQ9H7F4 350 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 TPT1P8Q9HAU6 139 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 CHST11Q9NPF2 352 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 POLE3Q9NRF9 147 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 MED17Q9NVC6 651 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 Q9UFV3 132 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 MRPS18CQ9Y3D5 142 aaKnown RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 L3MBTL1Q9Y468 752 aa9.24□□□□□ -0.93
NEK4-204ENST00000487068 KLF2Q9Y5W3 355 aaPredicted RBP9.24□□□□□ -0.93
NEK4-204ENST00000487068 A0A096LPI6 279 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 IGLV3-32A0A0A0MS00 114 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CENPVL1A0A0U1RR11 272 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 HSPB2A8KAH6 182 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 KDM4EB2RXH2 506 aaPredicted RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 EEF1E1-BLOC1S5C9J1V9 151 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 C5orf58C9J3I9 102 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 LINC01387J3KSC0 135 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 EIF1AYO14602 144 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 DVL2O14641 736 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 EEF1E1O43324 174 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 ZIC3O60481 467 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 UGT2B17O75795 530 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 EPPINO95925 133 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ZCCHC18P0CG32 403 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CPN1P15169 458 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 IL7RP16871 459 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 ZNF708P17019 499 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CAPN3P20807 821 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 ADH7P40394 386 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CRISP3P54108 245 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 SUMO3P55854 103 aaPredicted RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 EEFSECP57772 596 aaKnown RBP9.23□□□□□ -0.93
NEK4-204ENST00000487068 CBFBQ13951 182 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 GNA13Q14344 377 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 CDSNQ15517 529 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 HSPB2Q16082 182 aa9.23□□□□□ -0.93
NEK4-204ENST00000487068 PLPPR5Q32ZL2 321 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms