RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 VMP1Q96GC9 406 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 LIN37Q96GY3 246 aaPredicted RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 HS6ST2Q96MM7 605 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 DEPDC7Q96QD5 511 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 TAAR9Q96RI9 348 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 ULBP3Q9BZM4 244 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SEMA4CQ9C0C4 833 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 WWTR1Q9GZV5 400 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NXF5Q9H1B4 397 aaKnown RBP6.5□□□□□ -1.37
SF3A3-206ENST00000487062 IRF2BPLQ9H1B7 796 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 POLR1BQ9H9Y6 1135 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 VCX3AQ9NNX9 186 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 C11orf16Q9NQ32 467 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 MAN2C1Q9NTJ4 1040 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 IMPAD1Q9NX62 359 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SCN3BQ9NY72 215 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SELENONQ9NZV5 590 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 NDUFA13Q9P0J0 144 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 RPS6KB2Q9UBS0 482 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 KCNE5Q9UJ90 142 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 LOXL2Q9Y4K0 774 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 PCDHGA1Q9Y5H4 931 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 SEC16AO15027 2179 aa6.5□□□□□ -1.37
SF3A3-206ENST00000487062 LAMA1P25391 3075 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 A0A087WUU8 490 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CENPVL1A0A0U1RR11 272 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 DPPA5A6NC42 116 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 A6NHS1 94 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 H3BN98 237 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 GTPBP1O00178 669 aaKnown RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MPZL2O60487 215 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 UTS2O95399 124 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ANGPTL1O95841 491 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CCDC159P0C7I6 412 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 GKN3PP0CG01 181 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 SMIM18P0DKX4 95 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 PRG2P13727 222 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ATP6V1B1P15313 513 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF28P17035 718 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TBXA2RP21731 343 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MMP11P24347 488 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ELK4P28324 431 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 HLCSP50747 726 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 GPR143P51810 404 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 EFNA3P52797 238 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CXCR4P61073 352 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 COPZ1P61923 177 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 RNF4P78317 190 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 HOXC5Q00444 222 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 INSM1Q01101 510 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TEKQ02763 1124 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 PLCXD2Q0VAA5 305 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TSPAN31Q12999 210 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CDK5R2Q13319 367 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 APOFQ13790 326 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MAD2L1BPQ15013 274 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MEP1AQ16819 746 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ISXQ2M1V0 245 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 KLHL26Q53HC5 615 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CDCP2Q5VXM1 449 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ISLR2Q6UXK2 745 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 HSDL2Q6YN16 418 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MBOAT2Q6ZWT7 520 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 P3H2Q8IVL5 708 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 C9orf40Q8IXQ3 194 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CDK20Q8IZL9 346 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 NFAM1Q8NET5 270 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 OR5L2Q8NGL0 311 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 OR8K3Q8NH51 312 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 NUBPLQ8TB37 319 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 FAM81AQ8TBF8 368 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 RNF217Q8TC41 542 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF566Q969W8 418 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 EFHD2Q96C19 240 aaPredicted RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 MPP4Q96JB8 637 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 DDA1Q9BW61 102 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TEX12Q9BXU0 123 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 PRRG3Q9BZD7 231 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 FAM192AQ9GZU8 254 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 CXorf56Q9H5V9 222 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 DNAJB12Q9NXW2 375 aaKnown RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 SLC7A7Q9UM01 511 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 PPIEQ9UNP9 301 aaKnown RBP6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TMEM5Q9Y2B1 443 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 TPRKBQ9Y3C4 175 aa6.49□□□□□ -1.37
SF3A3-206ENST00000487062 EXPH5Q8NEV8 1989 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 IGHV3-20A0A0C4DH32 117 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 SMIM31A0A1B0GVY4 71 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 A0A1W2PQD3 144 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TRIM64A6NGJ6 449 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TRIM64CA6NLI5 447 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZAR1LA6NP61 321 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 E9PQ18 207 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 SLC1A7O00341 560 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF264O43296 627 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 CHP2O43745 196 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 TSPAN2O60636 221 aa6.48□□□□□ -1.37
SF3A3-206ENST00000487062 MRPS14O60783 128 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms