RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PAX9P55771 341 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ARPP19P56211 112 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MYBPC1Q00872 1141 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 CKAP4Q07065 602 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MFGE8Q08431 387 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ADIGQ0VDE8 80 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HSPA14Q0VDF9 509 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 EIF4EBP2Q13542 120 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SNX1Q13596 522 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 RAPSNQ13702 412 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MEF2DQ14814 521 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 EFTUD2Q15029 972 aaKnown RBP eCLIP3.47□□□□□ -1.855e-10■■■■□ 21.3
PTCD3-216ENST00000487043 TEAD2Q15562 447 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HADHQ16836 314 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SLC25A52Q3SY17 297 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ANKDD1AQ495B1 522 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 BOLA3Q53S33 107 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 IL23RQ5VWK5 629 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 LIPKQ5VXJ0 399 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SYPL2Q5VXT5 272 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 LIPJQ5W064 366 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 BSPRYQ5W0U4 402 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MEX3BQ6ZN04 569 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 CHMP1BQ7LBR1 199 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 STRADAQ7RTN6 431 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 CTAGE6Q86UF2 777 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 KATNAL2Q8IYT4 538 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 DND1Q8IYX4 353 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PARP8Q8N3A8 854 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 RAB42Q8N4Z0 105 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MINDY2Q8NBR6 621 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 FAM71CQ8NEG0 241 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MNS1Q8NEH6 495 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SPATA4Q8NEY3 305 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 IPMKQ8NFU5 416 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 OR6S1Q8NH40 331 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 RPLP0P6Q8NHW5 317 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MAPK15Q8TD08 544 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 DQX1Q8TE96 717 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 FAM172AQ8WUF8 416 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 NDRG1Q92597 394 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HIST1H2ACQ93077 130 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM45BQ96B21 275 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PGLYRP2Q96PD5 576 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PSMB7Q99436 277 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 NPY6RQ99463 290 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 TRIM62Q9BVG3 475 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PAPOLGQ9BWT3 736 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ULBP1Q9BZM6 244 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 NMNAT2Q9BZQ4 307 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ZBP1Q9H171 429 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 FBXO44Q9H4M3 255 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ACTR8Q9H981 624 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 POPDC2Q9HBU9 364 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 GDF3Q9NR23 364 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ABCC13Q9NSE7 274 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MED17Q9NVC6 651 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 STAP1Q9ULZ2 295 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SCML2Q9UQR0 700 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 KIAA1671Q9BY89 1806 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 A0A087WZY1 265 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 BLOC1S5-TXNDC5H3BN57 136 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PGRMC1O00264 195 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CCSO14618 274 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SURF4O15260 269 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PCDH7O60245 1069 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MAGEC1O60732 1142 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CSO75390 466 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 KHDRBS3O75525 346 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ANXA9O76027 345 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 IGLV3-25P01717 112 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 FGGP02679 453 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 RPLP0P05388 317 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 APRTP07741 180 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ZDHHC11BP0C7U3 371 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 MYOGP15173 224 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 HMGA1P17096 107 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 ATF6P18850 670 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 GLRA1P23415 457 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 KDELR1P24390 212 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CHRNB4P30926 498 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PRDX2P32119 198 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 CCKARP32238 428 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 RDXP35241 583 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SSR1P43307 286 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 TRPC1P48995 793 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 RGS19P49795 217 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SULT1E1P49888 294 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 AIF1P55008 147 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 YWHAGP61981 247 aaKnown RBP eCLIP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 TRA2BP62995 288 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PMP22Q01453 160 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 SLC25A11Q02978 314 aaKnown RBP3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PDZK1IP1Q13113 114 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 NME3Q13232 169 aa3.46□□□□□ -1.86
PTCD3-216ENST00000487043 PDK2Q15119 407 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms