RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 ARL6IP1Q15041 203 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 RSU1Q15404 277 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 HNRNPA1L2Q32P51 320 aaKnown RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ATAD3CQ5T2N8 411 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ZNF704Q6ZNC4 412 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 OR52E1Q8NGJ3 308 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 RNF186Q9NXI6 227 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ATPIF1Q9UII2 106 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ZNF443Q9Y2A4 671 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 CPNE6O95741 557 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 CDK3Q00526 305 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 SYPL1Q16563 259 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 TAS1R1Q7RTX1 841 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 PTRH1Q86Y79 214 aaKnown RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 UEVLDQ8IX04 471 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 KIAA1143Q96AT1 154 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ICKQ9UPZ9 632 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 IFNA1P01562 189 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 FBXO45P0C2W1 286 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 KIR2DS3Q14952 304 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 VRK2Q86Y07 508 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 BRIX1Q8TDN6 353 aaKnown RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 C16orf58Q96GQ5 468 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 FOXE1O00358 373 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 EGFP01133 1207 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 AHRP35869 848 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PSMB10P40306 273 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 ADAMTS14Q8WXS8 1223 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 KCMF1Q9P0J7 381 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 POU2F3Q9UKI9 436 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 SCML1Q9UN30 329 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 RNF215Q9Y6U7 377 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 NWD2Q9ULI1 1742 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PIGBOS1A0A0B4J2F0 54 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 BMP4P12644 408 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 HNRNPA2B1P22626 353 aaKnown RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 DPY19L2P1Q6NXN4 242 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 MACROD1Q9BQ69 325 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 NELFAQ9H3P2 528 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 ACSS1Q9NUB1 689 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 FAM227AF5H4B4 570 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 SEMA4FO95754 770 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PPA1Q15181 289 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 ZNF761Q86XN6 746 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PLXDC1Q8IUK5 500 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 SLC39A11Q8N1S5 342 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 ZNF587Q96SQ5 575 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 APMAPQ9HDC9 416 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 CD300AQ9UGN4 299 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 hCG_1807616A0A1W2PRN6 198 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 B8ZZF3 427 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 GASTP01350 101 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 TACR1P25103 407 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PTPN6P29350 595 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 CSNK2A1P68400 391 aaPredicted RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 Q6ZSR9 355 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 SLC16A9Q7RTY1 509 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 CSNK2A3Q8NEV1 391 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 HINT2Q9BX68 163 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PSORS1C1Q9UIG5 152 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 TRBV4-1A0A0J9YWV2 114 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 AP1G1O43747 822 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 RBMS1P29558 406 aaKnown RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 PTGER1P34995 402 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 AQP2P41181 271 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 SLC7A9P82251 487 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 TMEM151BQ8IW70 566 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 EVA1AQ9H8M9 152 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 ASF1BQ9NVP2 202 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 MYEF2Q9P2K5 600 aaKnown RBP15.44■□□□□ 0.06
COL7A1-210ENST00000487017 V9GY05 133 aa15.44■□□□□ 0.06
COL7A1-210ENST00000487017 A0A0J9YY10 115 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 DCDC2BA2VCK2 349 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 H0YIV9 168 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 GABRPO00591 440 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 CRYZL1O95825 349 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 HRGP04196 525 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 HIST1H1TP22492 207 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-210ENST00000487017 HOXD9P28356 352 aaPredicted RBP15.43■□□□□ 0.06
COL7A1-210ENST00000487017 GIPRP48546 466 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 TAS2R31P59538 309 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 MALLQ13021 153 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 TATDN3Q17R31 274 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 SLC6A19Q695T7 634 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 ZC3H14Q6PJT7 736 aaKnown RBP15.43■□□□□ 0.06
COL7A1-210ENST00000487017 SYT3Q9BQG1 590 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 HCFC1R1Q9NWW0 138 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 THEGLP0DJG4 465 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 GIFP27352 417 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 POLR2IP36954 125 aaKnown RBP15.43■□□□□ 0.06
COL7A1-210ENST00000487017 LEXMQ3ZCV2 418 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 GPR157Q5UAW9 335 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 SERPINA12Q8IW75 414 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 OR4F15Q8NGB8 312 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 LKAAEAR1Q8TD35 194 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 TRAV27A0A087WT01 109 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 ARHGAP33O14559 1287 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 UBL4AP11441 157 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 DLSTP36957 453 aa15.43■□□□□ 0.06
COL7A1-210ENST00000487017 TLE3Q04726 772 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms