RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 C15orf54Q8N8G6 183 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 SYT14Q8NB59 555 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 OR9A4Q8NGU2 314 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 TYMSOSQ8TAI1 123 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 FBXO30Q8TB52 745 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 FAHD2AQ96GK7 314 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 SIGLEC12Q96PQ1 595 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 RANBP9Q96S59 729 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 TEX13BQ9BXU2 312 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 MEAF6Q9HAF1 191 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 ELOVL3Q9HB03 270 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 NANSQ9NR45 359 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 C6orf203Q9P0P8 240 aaPredicted RBP3.47□□□□□ -1.85
SMC4-218ENST00000486711 RPH3ALQ9UNE2 315 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 MRPS33Q9Y291 106 aaKnown RBP3.47□□□□□ -1.85
SMC4-218ENST00000486711 L3MBTL1Q9Y468 752 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 OARD1Q9Y530 152 aa3.47□□□□□ -1.85
SMC4-218ENST00000486711 ATP10DQ9P241 1426 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 NOTCH2Q04721 2471 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 C15orf38-AP3S2A0A0A6YYH1 394 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 NPIPA7E9PJI5 369 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 MSH4O15457 936 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 N4BP1O75113 896 aaKnown RBP3.46□□□□□ -1.86
SMC4-218ENST00000486711 NPIPA8P0DM63 369 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 CPN1P15169 458 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 TPSB2P20231 275 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 GDF1P27539 372 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 HNMTP50135 292 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 PPT1P50897 306 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 SPIBQ01892 262 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 TPSAB1Q15661 275 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 GSG1Q2KHT4 349 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 TTC23Q5W5X9 447 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 TMEM225Q6GV28 225 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 SYT10Q6XYQ8 523 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 SERPINA9Q86WD7 417 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 HPS6Q86YV9 775 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 LRRC43Q8N309 656 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 GPD1LQ8N335 351 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 KLHL30-AS1Q8NEE0 82 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 SLC6A7Q99884 636 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 DPH7Q9BTV6 452 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 NXF5Q9H1B4 397 aaKnown RBP3.46□□□□□ -1.86
SMC4-218ENST00000486711 PRR34Q9NV39 138 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 NPIPA1Q9UND3 350 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 PPIAL4AQ9Y536 164 aa3.46□□□□□ -1.86
SMC4-218ENST00000486711 CROCCQ5TZA2 2017 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 DHRS7CA6NNS2 312 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 B4DXG7 233 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 EFNA2O43921 213 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 MTX2O75431 263 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 LRATO95237 230 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 F10P00742 488 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 H2BFMP0C1H6 154 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 IQCF3P0C7M6 154 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 UQCRC2P22695 453 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 PRKAR2BP31323 418 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 IL2RGP31785 369 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 HPCAL1P37235 193 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 MDH2P40926 338 aaKnown RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 EFNA3P52797 238 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 GBX2P52951 348 aaPredicted RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 ERVPABLB-1P60509 514 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 ST3GAL3Q11203 375 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 SYPL1Q16563 259 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 CCDC152Q4G0S7 254 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 PAN3Q58A45 887 aaKnown RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 PAGE2BQ5JRK9 111 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 ZNF658Q5TYW1 1059 aaPredicted RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 ATF7IP2Q5U623 682 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 OR5M10Q6IEU7 315 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 UFSP1Q6NVU6 142 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 KCNIP4Q6PIL6 250 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 VITQ6UXI7 678 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 RGS9BPQ6ZS82 235 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 C16orf62Q7Z3J2 963 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 VASH2Q86V25 355 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 ZNF683Q8IZ20 524 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 OR10A7Q8NGE5 316 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 PSMG2Q969U7 264 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 SH3YL1Q96HL8 342 aaPredicted RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 C7orf34Q96L11 122 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 C12orf66Q96MD2 445 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 CRACR2AQ9BSW2 395 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 ZSCAN5AQ9BUG6 496 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 XPO7Q9UIA9 1087 aaKnown RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 ZNF107Q9UII5 783 aaPredicted RBP3.45□□□□□ -1.86
SMC4-218ENST00000486711 FLVCR1Q9Y5Y0 555 aa3.45□□□□□ -1.86
SMC4-218ENST00000486711 IGHV3-35A0A0C4DH35 117 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 H3BMQ9 156 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 FCN1O00602 326 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 NUDT21O43809 227 aaKnown RBP3.44□□□□□ -1.86
SMC4-218ENST00000486711 SCRG1O75711 98 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 UGT2B17O75795 530 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 CABYRO75952 493 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 GLRA2P23416 452 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 RAB40BQ12829 278 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 DPYSL3Q14195 570 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 LAGE3Q14657 143 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms