RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 FXYD6Q9H0Q3 95 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 PIGUQ9H490 435 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 COPZ2Q9P299 210 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF69Q9UC07 566 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ERVK-19Q9WJR5 959 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 PTRH2Q9Y3E5 179 aaKnown RBP10.33□□□□□ -0.76
HDAC6-228ENST00000486227 A0A1W2PRQ8 180 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 EIF1AYO14602 144 aaKnown RBP10.33□□□□□ -0.76
HDAC6-228ENST00000486227 EEF1E1O43324 174 aaKnown RBP10.33□□□□□ -0.76
HDAC6-228ENST00000486227 FARS2O95363 451 aaKnown RBP10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ADPRHP54922 357 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 CTBP2P56545 445 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 SELENOVP59797 346 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 NKX3-2P78367 333 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 SF3A2Q15428 464 aaKnown RBP10.33□□□□□ -0.76
HDAC6-228ENST00000486227 TATDN3Q17R31 274 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 RPL13AP3Q6NVV1 102 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 PLBD1Q6P4A8 553 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 SHISA6Q6ZSJ9 500 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 FAM217AQ8IXS0 508 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM151AQ8N4L1 468 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ACBD7Q8N6N7 88 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 MFSD9Q8NBP5 474 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 C16orf58Q96GQ5 468 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 COQ10AQ96MF6 247 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 OR7D2Q96RA2 312 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF559Q9BR84 538 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 DPH1Q9BZG8 443 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF385DQ9H6B1 395 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 LAMP5Q9UJQ1 280 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ADAM29Q9UKF5 820 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 SLC7A7Q9UM01 511 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 PPT2Q9UMR5 302 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 GXYLT2A0PJZ3 443 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF879B4DU55 563 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 RP2O75695 350 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 VNN2O95498 520 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 GPR75O95800 540 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 OLFM2O95897 454 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 OR3A3P47888 321 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 TPMTP51580 245 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 METAP1P53582 386 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 REEP5Q00765 189 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 DPTQ07507 201 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 GPR18Q14330 331 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 COX20Q5RI15 118 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 GPAT4Q86UL3 456 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 DNAJC22Q8N4W6 341 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 OR13H1Q8NG92 308 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 SLC38A5Q8WUX1 472 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 NIPAL2Q9H841 368 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 COQ3Q9NZJ6 369 aa10.33□□□□□ -0.76
HDAC6-228ENST00000486227 A8MVJ9 347 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 LINC01565O15544 149 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 GLULP15104 373 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 IL32P24001 234 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PKLRP30613 574 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 SOX2P48431 317 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 SLC35A2P78381 396 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 AQP6Q13520 282 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OLFML2AQ68BL7 652 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TCEAL6Q6IPX3 200 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FAM83HQ6ZRV2 1179 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 VRK2Q86Y07 508 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 KLBQ86Z14 1044 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 SLC44A3Q8N4M1 653 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR4K13Q8NH42 304 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TM4SF18Q96CE8 201 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 COQ8BQ96D53 544 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 HOXD1Q9GZZ0 328 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 HPF1Q9NWY4 346 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 A0A1B0GVI7 797 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 OR2A25A4D2G3 310 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 ANKRD28O15084 1053 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CASC3O15234 703 aaKnown RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 BRINP1O60477 761 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 HTR1AP08908 422 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PGCP20142 388 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 NR0B1P51843 470 aaKnown RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PSMA6P60900 246 aaKnown RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 C1orf53Q5VUE5 145 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 RAET1LQ5VY80 246 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FRMPD2BQ6IN97 320 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 Q6ZPB1 254 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 FAM86B1Q8N7N1 296 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 CLEC1AQ8NC01 280 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 GALNT11Q8NCW6 608 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 TM9SF4Q92544 642 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 NSMAFQ92636 917 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 ALG14Q96F25 216 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 ATAD5Q96QE3 1844 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 AMBRA1Q9C0C7 1298 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-228ENST00000486227 PSORS1C1Q9UIG5 152 aa10.32□□□□□ -0.76
HDAC6-228ENST00000486227 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms