RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 TTC19Q6DKK2 380 aaPredicted RBP3.28□□□□□ -1.88
FN1-222ENST00000485567 RFWD3Q6PCD5 774 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 ADAMTSL5Q6ZMM2 481 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 EFL1Q7Z2Z2 1120 aaKnown RBP3.28□□□□□ -1.88
FN1-222ENST00000485567 KRT222Q8N1A0 295 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 CSGALNACT2Q8N6G5 542 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 BPIFCQ8NFQ6 507 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 RAB3IL1Q8TBN0 382 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 FNDC8Q8TC99 324 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 SLC22A8Q8TCC7 542 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 RLN3Q8WXF3 142 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 ANKRD7Q92527 254 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 ISG20Q96AZ6 181 aaKnown RBP3.28□□□□□ -1.88
FN1-222ENST00000485567 DHTKD1Q96HY7 919 aaPredicted RBP3.28□□□□□ -1.88
FN1-222ENST00000485567 ELMO2Q96JJ3 720 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 C18orf12Q96KH6 178 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 PANX2Q96RD6 677 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 PSMB7Q99436 277 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 SH3GL1Q99961 368 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 CITED1Q99966 193 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 SLC30A2Q9BRI3 323 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 COMMD4Q9H0A8 199 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 RHBGQ9H310 441 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 HEXA-AS1Q9H8Q6 139 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 CYP3A43Q9HB55 503 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 SPACA1Q9HBV2 294 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 AMBNQ9NP70 447 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 TUBG2Q9NRH3 451 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 C1orf123Q9NWV4 160 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 RDH8Q9NYR8 311 aa3.28□□□□□ -1.88
FN1-222ENST00000485567 ZNF346Q9UL40 294 aaKnown RBP3.28□□□□□ -1.88
FN1-222ENST00000485567 GAKO14976 1311 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 A0A0J9YWU9 116 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 BTBD17A6NE02 478 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 E9PQ18 207 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 C11orf98E9PRG8 122 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 K7ERQ8 282 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 YKT6O15498 198 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ZNF264O43296 627 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 SMC2O95347 1197 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 LGI1O95970 557 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 MBD3O95983 291 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 AGTP01019 485 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 NCF2P19878 526 aaPredicted RBP3.27□□□□□ -1.89
FN1-222ENST00000485567 U2AF2P26368 475 aaKnown RBP eCLIP3.27□□□□□ -1.89
FN1-222ENST00000485567 S100A5P33763 92 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 HTR2BP41595 481 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 MYL6P60660 151 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 OSTNP61366 133 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 CNTN2Q02246 1040 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 FCHO2Q0JRZ9 810 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 XRCC4Q13426 336 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 COTL1Q14019 142 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 RAB35Q15286 201 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ZNF506Q5JVG8 444 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ACER2Q5QJU3 275 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 DCST2Q5T1A1 773 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 PIP5KL1Q5T9C9 394 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 SEL1L3Q68CR1 1132 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 NANOGNBQ7Z5D8 188 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 CEACAM19Q7Z692 300 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 SERINC5Q86VE9 423 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ZNF440Q8IYI8 595 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 BBS1Q8NFJ9 593 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 DDI1Q8WTU0 396 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 CRYGNQ8WXF5 182 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 UPRTQ96BW1 309 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 DNAJA3Q96EY1 480 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 SLC41A3Q96GZ6 507 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 C4orf36Q96KX1 117 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ZNF599Q96NL3 588 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 RBM4BQ9BQ04 359 aaKnown RBP3.27□□□□□ -1.89
FN1-222ENST00000485567 UQCC2Q9BRT2 126 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 CRNKL1Q9BZJ0 848 aaKnown RBP3.27□□□□□ -1.89
FN1-222ENST00000485567 TRIM15Q9C019 465 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 MAGT1Q9H0U3 335 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 GPN2Q9H9Y4 310 aaPredicted RBP3.27□□□□□ -1.89
FN1-222ENST00000485567 CALHM2Q9HA72 323 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 ADGRL4Q9HBW9 690 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 NRBP2Q9NSY0 501 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 FAM120CQ9NX05 1096 aaKnown RBP3.27□□□□□ -1.89
FN1-222ENST00000485567 NOTCH4Q99466 2003 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 KIF27Q86VH2 1401 aa3.27□□□□□ -1.89
FN1-222ENST00000485567 IGHV3OR16-12A0A075B7B8 117 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 PPIAL4CA0A0B4J2A2 164 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 A0A0U1RQS6 177 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 ARHGEF35A5YM69 484 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 A8MUI8 341 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 RSPH10B2B2RC85 870 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 NIPSNAP2O75323 286 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 IGHV3-9P01782 118 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 MT-ND1P03886 318 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 OPN1LWP04000 364 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 CRYGCP07315 174 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 RSPH10BP0C881 870 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 ZNF853P0CG23 659 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 PPIAL4GP0DN37 164 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 IGFBP5P24593 272 aa3.26□□□□□ -1.89
FN1-222ENST00000485567 ATP5C1P36542 298 aaKnown RBP3.26□□□□□ -1.89
FN1-222ENST00000485567 DLSTP36957 453 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms