RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SLC15A4Q8N697 577 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SNIP1Q8TAD8 396 aaKnown RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ADAMTS16Q8TE57 1224 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 OIT3Q8WWZ8 545 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 MCHR1Q99705 422 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 FUZQ9BT04 418 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 BDH2Q9BUT1 245 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 RASSF4Q9H2L5 321 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 COQ10BQ9H8M1 238 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 NMNAT1Q9HAN9 279 aaPredicted RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 KLHL28Q9NXS3 571 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SLC13A4Q9UKG4 626 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SAMHD1Q9Y3Z3 626 aaKnown RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 KLK10O43240 276 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 HS6ST1O60243 411 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 CYP7B1O75881 506 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 LYPD3O95274 346 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 WISP1O95388 367 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 HPGDP15428 266 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 PRKACGP22612 351 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ITGA3P26006 1051 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 TMED10P49755 219 aaKnown RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SSR4P51571 173 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SEC23BQ15437 767 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 INPP5JQ15735 1006 aaPredicted RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 EXOC3L2Q2M3D2 409 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 CBR4Q8N4T8 237 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 PIK3C3Q8NEB9 887 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ASB15Q8WXK1 588 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 EME1Q96AY2 570 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SH3YL1Q96HL8 342 aaPredicted RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 TACO1Q9BSH4 297 aaKnown RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 TBL1XR1Q9BZK7 514 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ATP13A2Q9NQ11 1180 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 SLC35A3Q9Y2D2 325 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 CACNA1AO00555 2505 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 GNGT2O14610 69 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 EI24O14681 340 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 GMFGO60234 142 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 F10P00742 488 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 CCL3P10147 92 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 ELAVL4P26378 380 aaKnown RBP13.29□□□□□ -0.28
LRIF1-202ENST00000485275 RYKP34925 604 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 EPS8Q12929 822 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 JMJD6Q6NYC1 403 aaPredicted RBP13.29□□□□□ -0.28
LRIF1-202ENST00000485275 SHQ1Q6PI26 577 aaKnown RBP13.29□□□□□ -0.28
LRIF1-202ENST00000485275 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 NUP54Q7Z3B4 507 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 MDGA2Q7Z553 956 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 OFCC1Q8IZS5 231 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 CLEC1AQ8NC01 280 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF248Q8NDW4 579 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 THAP4Q8WY91 577 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 TTC9Q92623 222 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 NTNG2Q96CW9 530 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 FER1L6-AS2Q96M78 137 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 LHPPQ9H008 270 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 REEP1Q9H902 201 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 PROK2Q9HC23 129 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 TESQ9UGI8 421 aaKnown RBP13.29□□□□□ -0.28
LRIF1-202ENST00000485275 ICAM5Q9UMF0 924 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 MGAQ8IWI9 3026 aa13.29□□□□□ -0.28
LRIF1-202ENST00000485275 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 DLGAP1O14490 977 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 ADAMDEC1O15204 470 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF264O43296 627 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 NDUFB5O43674 189 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 E2F6O75461 281 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 ADRB1P08588 477 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 PTNP21246 168 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 FPR1P21462 350 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 VHLP40337 213 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 CASP3P42574 277 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 AQP4P55087 323 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 OR1Q1Q15612 314 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
LRIF1-202ENST00000485275 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 OR5M10Q6IEU7 315 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 OPN5Q6U736 354 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 PLEKHM3Q6ZWE6 761 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 GALNT16Q8N428 558 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 SLC7A13Q8TCU3 470 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 GATA6Q92908 595 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 TMCO6Q96DC7 493 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 EPYCQ99645 322 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 EXOSC3Q9NQT5 275 aaKnown RBP13.28□□□□□ -0.28
LRIF1-202ENST00000485275 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
LRIF1-202ENST00000485275 FAM32AQ9Y421 112 aaKnown RBP13.28□□□□□ -0.28
LRIF1-202ENST00000485275 NCOR2Q9Y618 2525 aa13.28□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF891A8MT65 544 aaPredicted RBP13.27□□□□□ -0.28
LRIF1-202ENST00000485275 G3V2T6 193 aa13.27□□□□□ -0.28
LRIF1-202ENST00000485275 HCRTR2O43614 444 aa13.27□□□□□ -0.28
LRIF1-202ENST00000485275 GADD45GO95257 159 aa13.27□□□□□ -0.28
LRIF1-202ENST00000485275 H1F0P07305 194 aaKnown RBP13.27□□□□□ -0.28
LRIF1-202ENST00000485275 DNAJA1P31689 397 aaKnown RBP13.27□□□□□ -0.28
LRIF1-202ENST00000485275 HMGA2P52926 109 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms