RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PIGQQ9BRB3 760 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 CALML5Q9NZT1 146 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 VAPAQ9P0L0 249 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 P2RX2Q9UBL9 471 aa16.1■□□□□ 0.17
SREBF1-213ENST00000485080 HEATR5AQ86XA9 2040 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CACNA1CQ13936 2221 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 OR2M5A3KFT3 312 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 AGAP5A6NIR3 686 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 FAM47E-STBD1D6RA91 191 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ETV2O00321 342 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ANGPT2O15123 496 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF264O43296 627 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 HCRTR2O43614 444 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 TNFRSF21O75509 655 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 EPPINO95925 133 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CHRM4P08173 479 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 NR2F1P10589 423 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 PEPDP12955 493 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF708P17019 499 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 GPX2P18283 190 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 RPS4Y1P22090 263 aaKnown RBP16.09■□□□□ 0.17
SREBF1-213ENST00000485080 LSP1P33241 339 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 EIF1P41567 113 aaKnown RBP16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CRATP43155 626 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 P2RX1P51575 399 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ZNF117Q03924 483 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ART3Q13508 389 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 FGFBP1Q14512 234 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 MAPK14Q16539 360 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 PLPPR5Q32ZL2 321 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 GPAT3Q53EU6 434 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ARSKQ6UWY0 536 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 C3P1Q6ZMU1 363 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 EIF3MQ7L2H7 374 aaKnown RBP16.09■□□□□ 0.17
SREBF1-213ENST00000485080 MRGPRGQ86SM5 289 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ADGRE4PQ86SQ3 457 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CMIPQ8IY22 773 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 METTL25Q8N6Q8 603 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 GATSQ8NAP1 163 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 SLC38A5Q8WUX1 472 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 ZG16BQ96DA0 208 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 TTYH2Q9BSA4 534 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 LAT2Q9GZY6 243 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 A4GALTQ9NPC4 353 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 MED17Q9NVC6 651 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 PRDM4Q9UKN5 801 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CORO2BQ9UQ03 480 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 SLC35A3Q9Y2D2 325 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 DSPPQ9NZW4 1301 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 UNC79Q9P2D8 2635 aa16.09■□□□□ 0.17
SREBF1-213ENST00000485080 CENPVL1A0A0U1RR11 272 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 CD8B2A6NJW9 211 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 GTPBP1O00178 669 aaKnown RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 LINGO3P0C6S8 592 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 GLI4P10075 376 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 UBL4AP11441 157 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 PSMA4P25789 261 aaKnown RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 ADH6P28332 368 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 CLDN18P56856 261 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 KLF10Q13118 480 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 SKP2Q13309 424 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 ACSF3Q4G176 576 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 RUNDC3AQ59EK9 446 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 RAET1LQ5VY80 246 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 CBLN3Q6UW01 205 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 OLIG3Q7RTU3 272 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 RETREG3Q86VR2 466 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 OR5W2Q8NH69 310 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 SH3YL1Q96HL8 342 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 RUBCNLQ9H714 662 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 BCL2L10Q9HD36 194 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 EXOSC3Q9NQT5 275 aaKnown RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 CARD8Q9Y2G2 431 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 RPH3AQ9Y2J0 694 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-213ENST00000485080 L3MBTL1Q9Y468 752 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 AP4B1Q9Y6B7 739 aa16.08■□□□□ 0.16
SREBF1-213ENST00000485080 ARHGAP21Q5T5U3 1957 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 OIP5O43482 229 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 NPPAP01160 153 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 TIMP3P35625 211 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 PGM1P36871 562 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF41P51814 821 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-213ENST00000485080 CRISP3P54108 245 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 DLX5P56178 289 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 NUP107P57740 925 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 MAPRE2Q15555 327 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 ZSWIM7Q19AV6 140 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 SLC25A53Q5H9E4 307 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 RIPPLY2Q5TAB7 128 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 NSUN5P2Q63ZY6 315 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 LACC1Q8IV20 430 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 RPRMLQ8N4K4 120 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 GPR119Q8TDV5 335 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 RND1Q92730 232 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 ANKRD27Q96NW4 1050 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 CGREF1Q99674 301 aa16.07■□□□□ 0.16
SREBF1-213ENST00000485080 TREX2Q9BQ50 279 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms