RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TPT1P8Q9HAU6 139 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 POLE3Q9NRF9 147 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 MED17Q9NVC6 651 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 FGFR1OP2Q9NVK5 253 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 STOML1Q9UBI4 398 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 LIPT1Q9Y234 373 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 SERINC4A6NH21 518 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 CD8B2A6NJW9 211 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 OIP5O43482 229 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 KIAA0513O60268 411 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 H6PDO95479 791 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 CSTAP01040 98 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 COX6B1P14854 86 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 TIMP3P35625 211 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 P2RX1P51575 399 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 EEFSECP57772 596 aaKnown RBP17.29■□□□□ 0.36
SNX17-206ENST00000484886 IRX1P78414 480 aaPredicted RBP17.29■□□□□ 0.36
SNX17-206ENST00000484886 FUT5Q11128 374 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 SF3A3Q12874 501 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■■□□□ 11.5
SNX17-206ENST00000484886 ZNF141Q15928 474 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 BCL2A1Q16548 175 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 SYPL1Q16563 259 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 PLPPR5Q32ZL2 321 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 TYW3Q6IPR3 259 aaKnown RBP17.29■□□□□ 0.36
SNX17-206ENST00000484886 BLOC1S3Q6QNY0 202 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 HMGN2P46Q86SG4 172 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 GRAMD2AQ8IUY3 354 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 ZNF619Q8N2I2 560 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 ANKFN1Q8N957 763 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 AURKBQ96GD4 344 aaPredicted RBP17.29■□□□□ 0.36
SNX17-206ENST00000484886 TMEM120AQ9BXJ8 343 aa17.29■□□□□ 0.36
SNX17-206ENST00000484886 C19orf84I3L1E1 186 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 ZNF264O43296 627 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 UGT2B17O75795 530 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 TOXO94900 526 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 ZNF17P17021 662 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 BMP5P22003 454 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 SUMO3P55854 103 aaPredicted RBP17.28■□□□□ 0.36
SNX17-206ENST00000484886 PPP4R4Q6NUP7 873 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 CBLN3Q6UW01 205 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 PLXDC2Q6UX71 529 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 FRRS1Q6ZNA5 592 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 EIF3MQ7L2H7 374 aaKnown RBP17.28■□□□□ 0.36
SNX17-206ENST00000484886 P4HA3Q7Z4N8 544 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 FUNDC1Q8IVP5 155 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 STON2Q8WXE9 905 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 RNF145Q96MT1 663 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 TRNT1Q96Q11 434 aaKnown RBP17.28■□□□□ 0.36
SNX17-206ENST00000484886 KCNE5Q9UJ90 142 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 AP4B1Q9Y6B7 739 aa17.28■□□□□ 0.36
SNX17-206ENST00000484886 A0A096LPI6 279 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 CENPVL1A0A0U1RR11 272 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 MBD3L4A6NDZ8 208 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 MBD3L3A6NE82 208 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 TMEM247A6NEH6 219 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 MBD3L5A6NJ08 208 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 H0YC42 278 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 DVL2O14641 736 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 EIF4E2O60573 245 aaKnown RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 UBTFL6P0CB48 400 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 ETFAP13804 333 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 CAPN3P20807 821 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 ME2P23368 584 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 TPD52P55327 224 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 DSTNP60981 165 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 RPS3AP61247 264 aaKnown RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 CHRNEQ04844 493 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 CBFBQ13951 182 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 SLC25A35Q3KQZ1 300 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 GTPBP8Q8N3Z3 284 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 C9orf106Q8NAJ2 232 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 NAXEQ8NCW5 288 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 TOR1AIP2Q8NFQ8 470 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 MBD3L2Q8NHZ7 208 aaPredicted RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 MARVELD3Q96A59 401 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 TM9SF2Q99805 663 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 KLHDC3Q9BQ90 382 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 PAIP1Q9H074 479 aaKnown RBP17.27■□□□□ 0.36
SNX17-206ENST00000484886 RAD21L1Q9H4I0 556 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 TMEM185BQ9H7F4 350 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 TMEM45AQ9NWC5 275 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 P2RX2Q9UBL9 471 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 ICAM5Q9UMF0 924 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 L3MBTL1Q9Y468 752 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 PCDHB14Q9Y5E9 798 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 KIAA1549Q9HCM3 1950 aa17.27■□□□□ 0.36
SNX17-206ENST00000484886 PRAMEF27A3QJZ7 478 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 EIF1AYO14602 144 aaKnown RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 HNRNPRO43390 633 aaKnown RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 OPN1LWP04000 364 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 CHRM4P08173 479 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 GUSBP08236 651 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 CEACAM8P31997 349 aaPredicted RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 EIF1P41567 113 aaKnown RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 MAGEA8P43361 318 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 SUCLG1P53597 346 aaKnown RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 CLDN20P56880 219 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms