RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CNTN4Q8IWV2 1026 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 UNC45BQ8IWX7 931 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 OR51G1Q8NGK1 321 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 OR52I1Q8NGK6 324 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 TRUB1Q8WWH5 349 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 RPUSD4Q96CM3 377 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 C2orf40Q9H1Z8 148 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 UTP6Q9NYH9 597 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 SAMD4AQ9UPU9 718 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 MAB21L2Q9Y586 359 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 LRP4O75096 1905 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 A0A0U1RQG5 324 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF705EA8MWA4 302 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 ALOX15BO15296 676 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 GOSR1O95249 250 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 XRCC1P18887 633 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 ATP5DP30049 168 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 NOVA1P51513 510 aaKnown RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 GFPT1Q06210 699 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 TSTA3Q13630 321 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 TFDP1Q14186 410 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 CDKN3Q16667 212 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 ZSCAN25Q6NSZ9 544 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 PAQR9Q6ZVX9 377 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 HSD11B1LQ7Z5J1 315 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 IFNEQ86WN2 208 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 MTURNQ8N3F0 131 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 OR1E3Q8WZA6 343 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 SLC25A36Q96CQ1 311 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 FAM210BQ96KR6 192 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF578Q96N58 590 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 GPN2Q9H9Y4 310 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-207ENST00000484275 GDAP2Q9NXN4 497 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 WDR45Q9Y484 360 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 OTOGLQ3ZCN5 2332 aa1.98□□□□□ -2.09
SCAF11-207ENST00000484275 LOC100131303A0A0U1RQF7 123 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 A0A0U1RQS6 177 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 KIR2DS1A0A191URI9 304 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ZBTB14O43829 449 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 VEGFDO43915 354 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 AIREO43918 545 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 HCN1O60741 890 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 KLF8O95600 359 aaPredicted RBP1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ABHD2P08910 425 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 SSTP61278 116 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 HERVK_113P63132 956 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ERVK-8P63133 956 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 KIR2DS1Q14954 304 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 DNM1P46Q6ZS02 220 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF709Q8N972 641 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 SNX21Q969T3 373 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 TBC1D10AQ9BXI6 508 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ERVK-6Q9BXR3 956 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 RBM28Q9NW13 759 aaKnown RBP1.97□□□□□ -2.09
SCAF11-207ENST00000484275 XPO7Q9UIA9 1087 aaKnown RBP1.97□□□□□ -2.09
SCAF11-207ENST00000484275 ERVW-1Q9UQF0 538 aa1.97□□□□□ -2.09
SCAF11-207ENST00000484275 PCM1Q15154 2024 aa1.96□□□□□ -2.09
SCAF11-207ENST00000484275 A0A1W2PRQ8 180 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 ZNF14P17017 642 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 PRDX6P30041 224 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 OTX2P32243 289 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 EMDP50402 254 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 MYBPC1Q00872 1141 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 CSTF1Q05048 431 aaKnown RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 LASP1Q14847 261 aaKnown RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 NSDHLQ15738 373 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 ACP7Q6ZNF0 438 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 C1orf186Q6ZWK4 172 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 CHCHD10Q8WYQ3 142 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 TMEM158Q8WZ71 300 aa1.96□□□□□ -2.1
SCAF11-207ENST00000484275 TEX13AQ9BXU3 409 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 PRMT8Q9NR22 394 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 C6orf203Q9P0P8 240 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 COL5A1P20908 1838 aaPredicted RBP1.96□□□□□ -2.1
SCAF11-207ENST00000484275 KINO60870 393 aaKnown RBP1.95□□□□□ -2.1
SCAF11-207ENST00000484275 HSF2BPO75031 334 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 SLC25A27O95847 323 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 ADRB3P13945 408 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 DLSTP36957 453 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 MTTPP55157 894 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 ACTA1P68133 377 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 MORF4L2Q15014 288 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 KRTAP13-2Q52LG2 175 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 ATF7IP2Q5U623 682 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 UNQ9370/PRO34162Q6UXP9 181 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 C10orf53Q8N6V4 93 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 LEMD2Q8NC56 503 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 OR2M2Q96R28 347 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 ZNF2Q9BSG1 426 aaPredicted RBP1.95□□□□□ -2.1
SCAF11-207ENST00000484275 NACA2Q9H009 215 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 DDX47Q9H0S4 455 aaKnown RBP1.95□□□□□ -2.1
SCAF11-207ENST00000484275 COG4Q9H9E3 785 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 CYP39A1Q9NYL5 469 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 OPN4Q9UHM6 478 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 NEUROG3Q9Y4Z2 214 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 GMPPBQ9Y5P6 360 aa1.95□□□□□ -2.1
SCAF11-207ENST00000484275 C11orf94C9JXX5 98 aa1.94□□□□□ -2.1
SCAF11-207ENST00000484275 FAM189A1O60320 539 aa1.94□□□□□ -2.1
SCAF11-207ENST00000484275 TRIM3O75382 744 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms