RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SMIM24O75264 130 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 TGM6O95932 706 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 OTCP00480 354 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 RBP1P09455 135 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PEPDP12955 493 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CRYGSP22914 178 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 DPP4P27487 766 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CRHR1P34998 444 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CD79BP40259 229 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 ALDH9A1P49189 494 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SERPINB8P50452 374 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 DSCR4P56555 118 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CLDN18P56856 261 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 TRA2BP62995 288 aaKnown RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 MRPS25P82663 173 aaKnown RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 RAB39AQ14964 217 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 UAP1Q16222 522 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 ERCC6LQ2NKX8 1250 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 GGTA1PQ4G0N0 100 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 TRMT12Q53H54 448 aaKnown RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SGO1Q5FBB7 561 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 RAET1LQ5VY80 246 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 VWA1Q6PCB0 445 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PLXDC2Q6UX71 529 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PRIMA1Q86XR5 153 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SAMD14Q8IZD0 417 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PQLC1Q8N2U9 271 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PTGR2Q8N8N7 351 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 OR52B6Q8NGF0 335 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SELENOMQ8WWX9 145 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 ERP27Q96DN0 273 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 STARD4Q96DR4 205 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PHF21BQ96EK2 531 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PERPQ96FX8 193 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 PGM2Q96G03 612 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SLC35A4Q96G79 324 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF845Q96IR2 970 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-207ENST00000483407 WFIKKN1Q96NZ8 548 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 BTBD9Q96Q07 612 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 ADOQ96SZ5 270 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 RAB17Q9H0T7 212 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 VPS11Q9H270 941 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 BRF2Q9HAW0 419 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 GIMAP4Q9NUV9 329 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 FBXL2Q9UKC9 423 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 UTS2RQ9UKP6 389 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 CES1P1Q9UKY3 287 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 NFU1Q9UMS0 254 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 SNX6Q9UNH7 406 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 TRIM64A6NGJ6 449 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TRIM64BA6NI03 449 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 SEC14L5O43304 696 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 EMC8O43402 210 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TSPAN2O60636 221 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TMCC2O75069 709 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ALDOAP04075 364 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 AMY1AP04745 511 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 FCGR2AP12318 317 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TCEA1P23193 301 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PHBP35232 272 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 UGT2B10P36537 528 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 EMDP50402 254 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PNLIPRP2P54317 469 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 RPS3AP61247 264 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 SIRPAP78324 504 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 MRPS35P82673 323 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 GALNT1Q10472 559 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TRAF3Q13114 568 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 GANABQ14697 944 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 LTB4RQ15722 352 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TECRLQ5HYJ1 363 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 OR5M10Q6IEU7 315 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF474Q6S9Z5 364 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PLEKHM3Q6ZWE6 761 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF550Q7Z398 422 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 UBQLNLQ8IYU4 475 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 SPATA4Q8NEY3 305 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 OR4F6Q8NGB9 312 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 FBXO25Q8TCJ0 367 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF675Q8TD23 568 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 CAVIN3Q969G5 261 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TM4SF18Q96CE8 201 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 CNRIP1Q96F85 164 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZC3HAV1LQ96H79 300 aaKnown RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 GPR78Q96P69 363 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PINK1Q9BXM7 581 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 STMN4Q9H169 189 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 OPN3Q9H1Y3 402 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-207ENST00000483407 CXorf56Q9H5V9 222 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PTGES2Q9H7Z7 377 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 FANCFQ9NPI8 374 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 SDHAF3Q9NRP4 125 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ING3Q9NXR8 418 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 TAS2R9Q9NYW1 312 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 GRHL1Q9NZI5 618 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms