RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
VARS-226ENST00000483275 C7orf72A4D263 438 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 TMEM233B4DJY2 109 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 LINGO3P0C6S8 592 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 IL32P24001 234 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 EDNRAP25101 427 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 MANFP55145 182 aaKnown RBP12.37□□□□□ -0.43
VARS-226ENST00000483275 CARD18P57730 90 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 TAB1Q15750 504 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
VARS-226ENST00000483275 VPS26BQ4G0F5 336 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 CPTPQ5TA50 214 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 SEZ6L2Q6UXD5 910 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 TRMT10CQ7L0Y3 403 aaKnown RBP12.37□□□□□ -0.43
VARS-226ENST00000483275 LCA5Q86VQ0 697 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 BANPQ8N9N5 519 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 B4GALNT2Q8NHY0 566 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
VARS-226ENST00000483275 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 C1orf109Q9NX04 203 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 KLHL13Q9P2N7 655 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 STOML1Q9UBI4 398 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 GDF2Q9UK05 429 aaPredicted RBP12.37□□□□□ -0.43
VARS-226ENST00000483275 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 GPR52Q9Y2T5 361 aa12.37□□□□□ -0.43
VARS-226ENST00000483275 C9JVG2 144 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 NPIPB8E9PQR5 432 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 SCDO00767 359 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ADAM11O75078 769 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 LYZL6O75951 148 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 NUDT14O95848 222 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ADAP00813 363 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 IGHV4-39P01824 125 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 CD3EP07766 207 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 NGFRP08138 427 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ALOX5P09917 674 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 LINC00032P0C843 101 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 DANCRP0C864 163 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 UROSP10746 265 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 HPGDP15428 266 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 PDE7AQ13946 482 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 LASP1Q14847 261 aaKnown RBP12.36□□□□□ -0.43
VARS-226ENST00000483275 GALNTL6Q49A17 601 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.36□□□□□ -0.43
VARS-226ENST00000483275 CCDC63Q8NA47 563 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 STEAP2Q8NFT2 490 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ZFP28Q8NHY6 868 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 FBXO27Q8NI29 283 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 FAM110BQ8TC76 370 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 PHOSPHO1Q8TCT1 267 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ACMSDQ8TDX5 336 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 ZNF775Q96BV0 537 aaPredicted RBP12.36□□□□□ -0.43
VARS-226ENST00000483275 FAM120BQ96EK7 910 aaKnown RBP12.36□□□□□ -0.43
VARS-226ENST00000483275 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
VARS-226ENST00000483275 CCT7Q99832 543 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 REG4Q9BYZ8 158 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 COQ10BQ9H8M1 238 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 UBQLN4Q9NRR5 601 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 SIRT3Q9NTG7 399 aaPredicted RBP12.36□□□□□ -0.43
VARS-226ENST00000483275 PRSS50Q9UI38 385 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 CARD8Q9Y2G2 431 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 KCNE3Q9Y6H6 103 aa12.36□□□□□ -0.43
VARS-226ENST00000483275 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 A0A1W2PNR3 127 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 A0A1W2PP18 115 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 TTC36A6NLP5 189 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 OVOL3O00110 214 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 PLIN3O60664 434 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 RAMP1O60894 148 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 GLRA3O75311 464 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 SHBGP04278 402 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ENPP1P22413 925 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 POU6F2P78424 691 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 STK11Q15831 433 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 PGGHGQ32M88 737 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 TMEM176BQ3YBM2 270 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 RFTN2Q52LD8 501 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 TMEM201Q5SNT2 666 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 NCMAPQ5T1S8 102 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 SFRP5Q5T4F7 317 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 CDC73Q6P1J9 531 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 Q6ZSR9 355 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 FCRLAQ7L513 359 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 TMCO5AQ8N6Q1 288 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 OR7A2PQ8NGA2 310 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 CEP70Q8NHQ1 597 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ACTRT2Q8TDY3 377 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms