RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	MED17	Q9NVC6	651 aa		11.17	□□□□□ -0.62
MRPL55-229	ENST00000483159	CCDC167	Q9P0B6	97 aa		11.17	□□□□□ -0.62
MRPL55-229	ENST00000483159	KCNE5	Q9UJ90	142 aa		11.17	□□□□□ -0.62
MRPL55-229	ENST00000483159	MKLN1	Q9UL63	735 aa		11.17	□□□□□ -0.62
MRPL55-229	ENST00000483159	CARD8	Q9Y2G2	431 aa		11.17	□□□□□ -0.62
MRPL55-229	ENST00000483159	DIDO1	Q9BTC0	2240 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	NPIPA5	A0A0B4J1W7	369 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	CLCA1	A8K7I4	914 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	NPIPA7	E9PJI5	369 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	DVL2	O14641	736 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	HNRNPR	O43390	633 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GMFG	O60234	142 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	DNAJA2	O60884	412 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	TNFRSF21	O75509	655 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	RCBTB2	O95199	551 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	LINGO3	P0C6S8	592 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	NPIPA8	P0DM63	369 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	TROVE2	P10155	538 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	UBL4A	P11441	157 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	NCF2	P19878	526 aa	Predicted RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	TCEA1	P23193	301 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	PSMA4	P25789	261 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GRN	P28799	593 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	MVD	P53602	400 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	RAC1	P63000	192 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GNA13	Q14344	377 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GPAT3	Q53EU6	434 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	PDZK1	Q5T2W1	519 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	HIST2H2BC	Q6DN03	193 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	CBLN3	Q6UW01	205 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	FRRS1	Q6ZNA5	592 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	LRRC74B	Q6ZQY2	392 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	ZNF619	Q8N2I2	560 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	ACBD4	Q8NC06	268 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	OR5W2	Q8NH69	310 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	RFWD2	Q8NHY2	731 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GPR119	Q8TDV5	335 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	TSPEAR	Q8WU66	669 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	SPDL1	Q96EA4	605 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	ARSG	Q96EG1	525 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	SPOCK3	Q9BQ16	436 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	LAT2	Q9GZY6	243 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	PAIP1	Q9H074	479 aa	Known RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	RAD21L1	Q9H4I0	556 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	SLC6A13	Q9NSD5	602 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	DCTN4	Q9UJW0	460 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	VDAC3	Q9Y277	283 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	SLC35A3	Q9Y2D2	325 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GPC6	Q9Y625	555 aa	Predicted RBP	11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	GMEB1	Q9Y692	573 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	ICE1	Q9Y2F5	2266 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	UNC79	Q9P2D8	2635 aa		11.16	□□□□□ -0.62
MRPL55-229	ENST00000483159	NCKAP5	O14513	1909 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	NCOA6	Q14686	2063 aa	Predicted RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159		A0A096LPI6	279 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159		A0A0G2JND7	137 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159		A0A1W2PP18	115 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	PRAMEF27	A3QJZ7	478 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159		H3BML4	177 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	H6PD	O95479	791 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	NUDT14	O95848	222 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	IL18BP	O95998	194 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CSTA	P01040	98 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	C1QC	P02747	245 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	NR2F1	P10589	423 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CTSS	P25774	331 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ELK4	P28324	431 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	OPRM1	P35372	400 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CRAT	P43155	626 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	SUCLG1	P53597	346 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CLDN15	P56746	228 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	RPS3A	P61247	264 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CHRNE	Q04844	493 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	TFF3	Q07654	80 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	FUT5	Q11128	374 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CBFB	Q13951	182 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	AGK	Q53H12	422 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	COX20	Q5RI15	118 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	LRIF1	Q5T3J3	769 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ZNF787	Q6DD87	383 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	SLC2A7	Q6PXP3	512 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	LIX1L	Q8IVB5	337 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CMIP	Q8IY22	773 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ZNF614	Q8N883	585 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	OR5M1	Q8NGP8	315 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	THOC1	Q96FV9	657 aa	Known RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	UCK2	Q9BZX2	261 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ENKD1	Q9H0I2	346 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ZNF385D	Q9H6B1	395 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CALML5	Q9NZT1	146 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CLCF1	Q9UBD9	225 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	P2RX2	Q9UBL9	471 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	PRDM4	Q9UKN5	801 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	L3MBTL1	Q9Y468	752 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	ZNF175	Q9Y473	711 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	PCDHB14	Q9Y5E9	798 aa		11.15	□□□□□ -0.62
MRPL55-229	ENST00000483159	CELSR2	Q9HCU4	2923 aa		11.15	□□□□□ -0.63
MRPL55-229	ENST00000483159	DNAJC13	O75165	2243 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms