RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 MSX1P28360 303 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 CCR4P51679 360 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 CRISP3P54108 245 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 GFRA1P56159 465 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 SRYQ05066 204 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 TOMM34Q15785 309 aaPredicted RBP18.44■□□□□ 0.54
CTSA-206ENST00000480961 WLSQ5T9L3 541 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 AP1ARQ63HQ0 302 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 VASNQ6EMK4 673 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 NANOGP8Q6NSW7 305 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 EIF3MQ7L2H7 374 aaKnown RBP18.44■□□□□ 0.54
CTSA-206ENST00000480961 VRK2Q86Y07 508 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 RPRMLQ8N4K4 120 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 FAM26EQ8N5C1 309 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 RP9Q8TA86 221 aaKnown RBP18.44■□□□□ 0.54
CTSA-206ENST00000480961 ZNF524Q96C55 264 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 NANOGQ9H9S0 305 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 MED17Q9NVC6 651 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 THUMPD1Q9NXG2 353 aaKnown RBP18.44■□□□□ 0.54
CTSA-206ENST00000480961 ICAM5Q9UMF0 924 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 CAMK2AQ9UQM7 478 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 MRPS18CQ9Y3D5 142 aaKnown RBP18.44■□□□□ 0.54
CTSA-206ENST00000480961 GMEB1Q9Y692 573 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 NCKAP5O14513 1909 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 ZGRF1Q86YA3 2104 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 LRRK2Q5S007 2527 aa18.44■□□□□ 0.54
CTSA-206ENST00000480961 A0A1B0GUH1 482 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 C5orf58C9J3I9 102 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 FXYD1O00168 92 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 AIM2O14862 343 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 ZNF264O43296 627 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 ESRRAP11474 423 aaPredicted RBP18.43■□□□□ 0.54
CTSA-206ENST00000480961 FGFBP1Q14512 234 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 ADRM1Q16186 407 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 RABL3Q5HYI8 236 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 COQ5Q5HYK3 327 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 CNOT9Q92600 299 aaKnown RBP18.43■□□□□ 0.54
CTSA-206ENST00000480961 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.43■□□□□ 0.54
CTSA-206ENST00000480961 CORO2BQ9UQ03 480 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 ZNF337Q9Y3M9 751 aa18.43■□□□□ 0.54
CTSA-206ENST00000480961 A0A0G2JPF8 293 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 OR2M5A3KFT3 312 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 CLEC18AA5D8T8 446 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 HNRNPCL2B2RXH8 293 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 HNRNPCL3B7ZW38 293 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 EIF4E2O60573 245 aaKnown RBP18.42■□□□□ 0.54
CTSA-206ENST00000480961 HNRNPCL1O60812 293 aaKnown RBP18.42■□□□□ 0.54
CTSA-206ENST00000480961 SHOX2O60902 331 aaPredicted RBP18.42■□□□□ 0.54
CTSA-206ENST00000480961 HNRNPCL4P0DMR1 293 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 ARAFP10398 606 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 IL7RP16871 459 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 GCKP35557 465 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 PGM1P36871 562 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 P2RX1P51575 399 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 ZNF41P51814 821 aaPredicted RBP18.42■□□□□ 0.54
CTSA-206ENST00000480961 KCNJ10P78508 379 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 CDK6Q00534 326 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 PLAURQ03405 335 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 SKP2Q13309 424 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 GNA13Q14344 377 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 GANABQ14697 944 aaKnown RBP18.42■□□□□ 0.54
CTSA-206ENST00000480961 CYP51A1Q16850 503 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 NHSL2Q5HYW2 709 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 CLEC18BQ6UXF7 455 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 PCYOX1LQ8NBM8 494 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 CLEC18CQ8NCF0 446 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 OR52P1PQ8NH57 321 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 OR10A6Q8NH74 314 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 GPR119Q8TDV5 335 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 WDR60Q8WVS4 1066 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 DTNBP1Q96EV8 351 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 WDYHV1Q96HA8 205 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 LAT2Q9GZY6 243 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 RLIMQ9NVW2 624 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 CALML5Q9NZT1 146 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 MEMO1Q9Y316 297 aa18.42■□□□□ 0.54
CTSA-206ENST00000480961 KDM4EB2RXH2 506 aaPredicted RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 FAM47E-STBD1D6RA91 191 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 ZG16O60844 167 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 PGM3O95394 542 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 ACTL6AO96019 429 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 OPN1LWP04000 364 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 DBIP07108 87 aaKnown RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 RPS4Y1P22090 263 aaKnown RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 AQP1P29972 269 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 RYKP34925 604 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 ADH7P40394 386 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 LHX2P50458 406 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 SCARB2Q14108 478 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 PLPPR5Q32ZL2 321 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 RTL6Q6ICC9 239 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 AAGABQ6PD74 315 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 LSRQ86X29 649 aaPredicted RBP18.41■□□□□ 0.54
CTSA-206ENST00000480961 PTOV1Q86YD1 416 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 PEX5LQ8IYB4 626 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 ULK2Q8IYT8 1036 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 OR5W2Q8NH69 310 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 POC1BQ8TC44 478 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 SMPDL3BQ92485 455 aa18.41■□□□□ 0.54
CTSA-206ENST00000480961 CCDC120Q96HB5 630 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms