RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ECSITQ9BQ95 431 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 DEFB127Q9H1M4 99 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 DSN1Q9H410 356 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 RLIMQ9NVW2 624 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 THUMPD1Q9NXG2 353 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 TAS2R1Q9NYW7 299 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 ABCD2Q9UBJ2 740 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 CD300AQ9UGN4 299 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 CORO2BQ9UQ03 480 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 NDUFB5O43674 189 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 GMFGO60234 142 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 PDE9AO76083 593 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CALB2P22676 271 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 AQP1P29972 269 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 PGM1P36871 562 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 ADH7P40394 386 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 GSK3BP49841 420 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CRISP3P54108 245 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 RBBP4Q09028 425 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 C17orf67Q0P5P2 114 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 BNIP1Q12981 228 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 FGFBP1Q14512 234 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CYP51A1Q16850 503 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF630Q2M218 657 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 VMACQ2NL98 169 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 FGD2Q7Z6J4 655 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 IFNEQ86WN2 208 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 PLCZ1Q86YW0 608 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CHERPQ8IWX8 916 aaKnown RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 METTL25Q8N6Q8 603 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 RNF148Q8N7C7 305 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 C11orf65Q8NCR3 313 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 OR1J4Q8NGS1 313 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CNOT9Q92600 299 aaKnown RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 REXO5Q96IC2 774 aaKnown RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CDRT15Q96T59 188 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 ZDHHC11Q9H8X9 412 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 SUCOQ9UBS9 1254 aaKnown RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 ICAM5Q9UMF0 924 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 CARD8Q9Y2G2 431 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 C15orf41Q9Y2V0 281 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 L3MBTL1Q9Y468 752 aa11.12□□□□□ -0.63
TRA2B-212ENST00000480461 GPC6Q9Y625 555 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-212ENST00000480461 PCNX3Q9H6A9 2034 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 NPIPA5E9PKD4 350 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 M0QX08 132 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 SCDO00767 359 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 CBR3O75828 277 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 MFN2O95140 757 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PCGF2P35227 344 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 EEF1A1P68104 462 aaKnown RBP11.11□□□□□ -0.63
TRA2B-212ENST00000480461 KCNJ10P78508 379 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 ALDH6A1Q02252 535 aaKnown RBP11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF117Q03924 483 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 DMTNQ08495 405 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-212ENST00000480461 INAQ16352 499 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 GLIPR1L2Q4G1C9 344 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PRAMEF8Q5VWM4 474 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PRAMEF7Q5VXH5 474 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 ARSKQ6UWY0 536 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 DEFB107AQ8IZN7 70 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 FAM156AQ8NDB6 213 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 FAM71CQ8NEG0 241 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 OR52P1PQ8NH57 321 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PHOSPHO1Q8TCT1 267 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 NR4A3Q92570 626 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PMM1Q92871 262 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 MARVELD3Q96A59 401 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 SH3YL1Q96HL8 342 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF597Q96LX8 424 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF703Q9H7S9 590 aaPredicted RBP11.11□□□□□ -0.63
TRA2B-212ENST00000480461 CALML5Q9NZT1 146 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 PPP4R1LQ9P1A2 415 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 NPIPA1Q9UND3 350 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 LIPGQ9Y5X9 500 aa11.11□□□□□ -0.63
TRA2B-212ENST00000480461 NCKAP5O14513 1909 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 FAM220BPB1ANY3 271 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 DNAJA2O60884 412 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 PRG2P13727 222 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 NID1P14543 1247 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ETS2P15036 469 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 HPGDP15428 266 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF24P17028 368 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 MASP1P48740 699 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
TRA2B-212ENST00000480461 MNAT1P51948 309 aa11.1□□□□□ -0.63
TRA2B-212ENST00000480461 EEFSECP57772 596 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms