RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF675Q8TD23 568 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 OR5P2Q8WZ92 322 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 TM9SF4Q92544 642 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 NCLNQ969V3 563 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 PPWD1Q96BP3 646 aaKnown RBP5.72□□□□□ -1.49
SF3B1-209ENST00000479532 TESCQ96BS2 214 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 MOAP1Q96BY2 351 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 THOC3Q96J01 351 aaKnown RBP5.72□□□□□ -1.49
SF3B1-209ENST00000479532 PLEKHA8Q96JA3 519 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 MARK4Q96L34 752 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 TUBA1CQ9BQE3 449 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 BCL7BQ9BQE9 202 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 EBF4Q9BQW3 602 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 CNPPD1Q9BV87 410 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 DEFB126Q9BYW3 111 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 OR8D2Q9GZM6 311 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 LHPPQ9H008 270 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 CLMPQ9H6B4 373 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 S100A14Q9HCY8 104 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 MMP25Q9NPA2 562 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 C8orf4Q9NR00 106 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 ACSS1Q9NUB1 689 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-209ENST00000479532 TMEM45AQ9NWC5 275 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 FAM120CQ9NX05 1096 aaKnown RBP5.72□□□□□ -1.49
SF3B1-209ENST00000479532 TAS2R1Q9NYW7 299 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 PRODH2Q9UF12 536 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 ERVK-19Q9WJR5 959 aa5.72□□□□□ -1.49
SF3B1-209ENST00000479532 WDFY3Q8IZQ1 3526 aa5.71□□□□□ -1.49
SF3B1-209ENST00000479532 URB1O60287 2271 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 AHCTF1Q8WYP5 2266 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 A0A087WV62 115 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TRBV11-1A0A0K0K1C0 115 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TRIM64A6NGJ6 449 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC154A6NI56 674 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 A6NL46 340 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CAPN14A8MX76 684 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 MYO1GB0I1T2 1018 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 RNASET2O00584 256 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PRAMEF2O60811 474 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CRYZL1O95825 349 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ABCB1P08183 1280 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 IFI6P09912 130 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SFTPCP11686 197 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PRKACBP22694 351 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ADSLP30566 484 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SOAT1P35610 550 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PGM1P36871 562 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 MRPL19P49406 292 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CCL11P51671 97 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 UFM1P61960 85 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 DCAF7P61962 342 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ESRRGP62508 458 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PSPHP78330 225 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 S100A12P80511 92 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TXNL4AP83876 142 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SF3A3Q12874 501 aaKnown RBP eCLIP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 NFATC3Q12968 1075 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TP53BP2Q13625 1128 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF267Q14586 743 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ZNHIT3Q15649 155 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CEBPEQ15744 281 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 MEP1AQ16819 746 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PRICKLE4Q2TBC4 344 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 COL28A1Q2UY09 1125 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 FAM174BQ3ZCQ3 159 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SPDYE7PQ495Y7 208 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 AGKQ53H12 422 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CRB2Q5IJ48 1285 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ABHD17BQ5VST6 288 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM198Q66K66 360 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRD26P1Q6NSI1 321 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 MSANTD1Q6ZTZ1 278 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SZRD1Q7Z422 152 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 HPS6Q86YV9 775 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 RIMKLAQ8IXN7 391 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 LGI4Q8N135 537 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 KRTCAP2Q8N6L1 136 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TRIML2Q8N7C3 387 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 STPG3Q8N7X2 389 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 OR4A15Q8NGL6 344 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 OR9A2Q8NGT5 310 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PNPT1Q8TCS8 783 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PTPMT1Q8WUK0 201 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 UCN3Q969E3 161 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CIDECQ96AQ7 238 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 COQ8BQ96D53 544 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CNRIP1Q96F85 164 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SENP5Q96HI0 755 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ITCHQ96J02 903 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TXNDC15Q96J42 360 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 IMMP1LQ96LU5 166 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF354BQ96LW1 612 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF681Q96N22 645 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 AMDHD1Q96NU7 426 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 AGAP4Q96P64 663 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 OR52E6Q96RD3 313 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CDRT15Q96T59 188 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms