RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 C1QTNF3Q9BXJ4 246 aa14.24□□□□□ -0.13
DDX56-210ENST00000479440 MRPL46Q9H2W6 279 aaKnown RBP14.24□□□□□ -0.13
DDX56-210ENST00000479440 GLIPR2Q9H4G4 154 aa14.24□□□□□ -0.13
DDX56-210ENST00000479440 EQTNQ9NQ60 294 aa14.24□□□□□ -0.13
DDX56-210ENST00000479440 RNF14Q9UBS8 474 aa14.24□□□□□ -0.13
DDX56-210ENST00000479440 A8MT66 165 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 ZNF814B7Z6K7 855 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 SCDO00767 359 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 ANXA4P09525 319 aaPredicted RBP14.23□□□□□ -0.13
DDX56-210ENST00000479440 DHRS4L1P0CG22 281 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 GGT1P19440 569 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 OR3A2P47893 321 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 CLCQ05315 142 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 C2orf80Q0P641 193 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 SLC22A25Q6T423 547 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 Q6ZSR9 355 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 B4GALNT2Q8NHY0 566 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 FBXO25Q8TCJ0 367 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 GPR151Q8TDV0 419 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 PIK3R3Q92569 461 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 HTRA1Q92743 480 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 AMDHD1Q96NU7 426 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 MRPL57Q9BQC6 102 aaKnown RBP14.23□□□□□ -0.13
DDX56-210ENST00000479440 BCO1Q9HAY6 547 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 NPAP1Q9NZP6 1156 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 ZNF225Q9UK10 706 aa14.23□□□□□ -0.13
DDX56-210ENST00000479440 UTP11Q9Y3A2 253 aaKnown RBP14.23□□□□□ -0.13
DDX56-210ENST00000479440 LOC100289279A0A1B0GTE1 492 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 CCDC151A5D8V7 595 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 OR5H1A6NKK0 313 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 COL6A2P12110 1019 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 COX5AP20674 150 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 SHC1P29353 583 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 LCN1P31025 176 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 PHBP35232 272 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 FABP6P51161 128 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 EFNA4P52798 201 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 MANFP55145 182 aaKnown RBP14.22□□□□□ -0.13
DDX56-210ENST00000479440 FAM219BQ5XKK7 198 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 ZNF544Q6NX49 715 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 KLHL17Q6TDP4 642 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 GPRIN3Q6ZVF9 776 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 DEPDC4Q8N2C3 294 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 RFLNBQ8N5W9 214 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 CDRT4Q8N9R6 151 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 OR4C3Q8NH37 302 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 ZFP90Q8TF47 636 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 ZNF382Q96SR6 550 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 NAPGQ99747 312 aaPredicted RBP14.22□□□□□ -0.13
DDX56-210ENST00000479440 PIMREGQ9BSJ6 248 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 PRSS50Q9UI38 385 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 STK38LQ9Y2H1 464 aa14.22□□□□□ -0.13
DDX56-210ENST00000479440 A0A1W2PQD3 144 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 E7EQL1 145 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 RAD51CO43502 376 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 RGS14O43566 566 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 TCF21O43680 179 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 NKX2-2O95096 273 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 LINGO3P0C6S8 592 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 PRPS2P11908 318 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 PTAFRP25105 342 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 HSD17B3P37058 310 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 MAGEA12P43365 314 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 PRIM2P49643 509 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 HTR6P50406 440 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 BTKQ06187 659 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 GGTLC2Q14390 218 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 ARL13AQ5H913 290 aaPredicted RBP14.21□□□□□ -0.13
DDX56-210ENST00000479440 MEX3DQ86XN8 651 aaKnown RBP14.21□□□□□ -0.13
DDX56-210ENST00000479440 METTL6Q8TCB7 284 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 PSD2Q9BQI7 771 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 IQCGQ9H095 443 aaKnown RBP14.21□□□□□ -0.13
DDX56-210ENST00000479440 RAB17Q9H0T7 212 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 EML4Q9HC35 981 aaKnown RBP14.21□□□□□ -0.13
DDX56-210ENST00000479440 MYNNQ9NPC7 610 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 SIRT5Q9NXA8 310 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 TAS2R7Q9NYW3 318 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 FKBP7Q9Y680 259 aa14.21□□□□□ -0.13
DDX56-210ENST00000479440 SLC35F4A4IF30 521 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 NDUFS8O00217 210 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 SPRY1O43609 319 aaPredicted RBP14.2□□□□□ -0.14
DDX56-210ENST00000479440 KIAA0513O60268 411 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 SUPT7LO94864 414 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 APEHP13798 732 aaKnown RBP14.2□□□□□ -0.14
DDX56-210ENST00000479440 IGHV1-2P23083 117 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 SLC7A1P30825 629 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 GPC1P35052 558 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 PDLIM4P50479 330 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 CHRNB3Q05901 458 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 SPOCK1Q08629 439 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 HSPB3Q12988 150 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 SELENBP1Q13228 472 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 FAM71E1Q6IPT2 247 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 IKBIPQ70UQ0 350 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 OR6Y1Q8NGX8 325 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 HOXB13Q92826 284 aaPredicted RBP14.2□□□□□ -0.14
DDX56-210ENST00000479440 CXorf36Q9H7Y0 433 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 COQ10BQ9H8M1 238 aa14.2□□□□□ -0.14
DDX56-210ENST00000479440 UBQLN4Q9NRR5 601 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms