RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ABCG4Q9H172 646 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 TNMDQ9H2S6 317 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 DPEP3Q9H4B8 488 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 SP140LQ9H930 580 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 WDR41Q9HAD4 459 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 VAT1LQ9HCJ6 419 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 HPS4Q9NQG7 708 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 ZNF302Q9NR11 478 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 THYN1Q9P016 225 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 VPS54Q9P1Q0 977 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 KCNN3Q9UGI6 736 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 OBSL1O75147 1896 aa4.06□□□□□ -1.76
RFC4-212ENST00000479307 BAZ2BQ9UIF8 2168 aaKnown RBP4.06□□□□□ -1.76
RFC4-212ENST00000479307 NBASA2RRP1 2371 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CABIN1Q9Y6J0 2220 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 PHLPP2Q6ZVD8 1323 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 K7ENP7 123 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 FBP2O00757 339 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 ZNF749O43361 778 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CSO75390 466 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 SEC22BO75396 215 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 PAX7P23759 505 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 PITPNBP48739 271 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 HNRNPFP52597 415 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 RIDAP52758 137 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 SRP54P61011 504 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 HMGN5P82970 282 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 ZNF33AQ06730 810 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 TRADDQ15628 312 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 NEK5Q6P3R8 708 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CATSPER4Q7RTX7 472 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 ITIH5Q86UX2 942 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 KCNMB4Q86W47 210 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 WDR49Q8IV35 697 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 PARP8Q8N3A8 854 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 ICA1LQ8NDH6 482 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CNNM3Q8NE01 707 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 TMEM185AQ8NFB2 350 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CCDC26Q8TAB7 109 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 PCNPQ8WW12 178 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 ESAMQ96AP7 390 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 P2RY13Q9BPV8 354 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CABLES2Q9BTV7 478 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 GFRA4Q9GZZ7 299 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 TUBB1Q9H4B7 451 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 SYTL2Q9HCH5 934 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 HOMER3Q9NSC5 361 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 FAM212BQ9NTI7 297 aaPredicted RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 DEPPQ9NTK1 212 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 ERVK-18Q9QC07 812 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 CTSZQ9UBR2 303 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 FETUBQ9UGM5 382 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 ODF2LQ9ULJ1 636 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 MMP17Q9ULZ9 603 aa4.05□□□□□ -1.76
RFC4-212ENST00000479307 DIMT1Q9UNQ2 313 aaKnown RBP4.05□□□□□ -1.76
RFC4-212ENST00000479307 NIPBLQ6KC79 2804 aaeCLIP4.05□□□□□ -1.76
RFC4-212ENST00000479307 TRBV5-4A0A0C4DH59 114 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 RNF103-CHMP3A0A140T963 221 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ARHGAP42A6NI28 874 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 A8MXK9 166 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 TSPAN2O60636 221 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ANXA9O76027 345 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 PRAMEF12O95522 483 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 POP4O95707 220 aaKnown RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 CALCAP01258 141 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ALPPP05187 535 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 HIST1H2AGP0C0S8 130 aaPredicted RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 ALPPL2P10696 532 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 MBL2P11226 248 aaPredicted RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 OXTRP30559 389 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 LIMK2P53671 638 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 PEX3P56589 373 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 RUNX3Q13761 415 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 SLC17A1Q14916 467 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 EXOSC7Q15024 291 aaKnown RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 P2RY14Q15391 338 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ALX1Q15699 326 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 LINC00303Q3SY05 128 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 POM121L1PQ3SYA9 428 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 MUC21Q5SSG8 566 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 SLC8B1Q6J4K2 584 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 CATSPER3Q86XQ3 398 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 LMNTD2Q8IXW0 634 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 NEK11Q8NG66 645 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ZNF461Q8TAF7 563 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 RDH11Q8TC12 318 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 MIPOL1Q8TD10 442 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 HIST1H2ACQ93077 130 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 TMEM186Q96B77 213 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 MRPL53Q96EL3 112 aaKnown RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 ZNF578Q96N58 590 aaPredicted RBP4.04□□□□□ -1.76
RFC4-212ENST00000479307 SPATA13Q96N96 652 aa4.04□□□□□ -1.76
RFC4-212ENST00000479307 ANKRD27Q96NW4 1050 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms