RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC29A2Q14542 456 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 RASA2Q15283 850 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 TSNAXIP1Q2TAA8 658 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 GLE1Q53GS7 698 aaKnown RBP15.19■□□□□ 0.02
VIM-204ENST00000478746 TIMM23BQ5SRD1 257 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 GALNT18Q6P9A2 607 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 SSX8Q7RTT4 187 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 MUC15Q8N387 334 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 CDC26Q8NHZ8 85 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 METTL6Q8TCB7 284 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 TAS2R7Q9NYW3 318 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 POU2F3Q9UKI9 436 aa15.19■□□□□ 0.02
VIM-204ENST00000478746 LOC100289279A0A1B0GTE1 492 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 PGRP06401 933 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 NGFRP08138 427 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 COL6A2P12110 1019 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 HPGDP15428 266 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 HNF1AP20823 631 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 HMOX2P30519 316 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 EIF1P41567 113 aaKnown RBP15.18■□□□□ 0.02
VIM-204ENST00000478746 OR3A2P47893 321 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 FABP6P51161 128 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 GUCY2DQ02846 1103 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 SQLEQ14534 574 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 SLC22A25Q6T423 547 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 P2RY8Q86VZ1 359 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 SLC43A2Q8N370 569 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 FBXO25Q8TCJ0 367 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 AMDHD1Q96NU7 426 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
VIM-204ENST00000478746 C1QTNF3Q9BXJ4 246 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 EQTNQ9NQ60 294 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 MIEF1Q9NQG6 463 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 NPAP1Q9NZP6 1156 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 PRSS50Q9UI38 385 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 MGAT4BQ9UQ53 548 aa15.18■□□□□ 0.02
VIM-204ENST00000478746 UTP11Q9Y3A2 253 aaKnown RBP15.18■□□□□ 0.02
VIM-204ENST00000478746 GOLGA8QA0A0J9YX86 632 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 SLC35F4A4IF30 521 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 GOLGA8OA6NCC3 632 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 GJE1A6NN92 205 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 GOLGA8NF8WBI6 632 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 GOLGA8RI6L899 631 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 CSF3P09919 207 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 LINGO3P0C6S8 592 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 GGT1P19440 569 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 TMEM176BQ3YBM2 270 aaPredicted RBP15.17■□□□□ 0.02
VIM-204ENST00000478746 VPS26BQ4G0F5 336 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 TMEM108Q6UXF1 575 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 MISPQ8IVT2 679 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 C17orf53Q8N3J3 647 aaPredicted RBP15.17■□□□□ 0.02
VIM-204ENST00000478746 SPATA4Q8NEY3 305 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 B4GALNT2Q8NHY0 566 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 KLHDC3Q9BQ90 382 aa15.17■□□□□ 0.02
VIM-204ENST00000478746 MRPL46Q9H2W6 279 aaKnown RBP15.17■□□□□ 0.02
VIM-204ENST00000478746 A8MT66 165 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 C9JVG2 144 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 H7C417 338 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ZNF195O14628 629 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 EFNA2O43921 213 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 SUPT7LO94864 414 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 NKX2-2O95096 273 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 PRPS2P11908 318 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ENPP1P22413 925 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ELK4P28324 431 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 EFNA4P52798 201 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ZNF763Q0D2J5 394 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 SPDYAQ5MJ70 313 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 FAM71E1Q6IPT2 247 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 GPRIN3Q6ZVF9 776 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 DEPDC4Q8N2C3 294 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ATP6V1C2Q8NEY4 427 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 ZNF775Q96BV0 537 aaPredicted RBP15.16■□□□□ 0.02
VIM-204ENST00000478746 PLA2G12AQ9BZM1 189 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 BCO1Q9HAY6 547 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 UBQLN4Q9NRR5 601 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 SIRT5Q9NXA8 310 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 KLHL9Q9P2J3 617 aa15.16■□□□□ 0.02
VIM-204ENST00000478746 IGHV3-15A0A0B4J1V0 119 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 OR5H1A6NKK0 313 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 SCDO00767 359 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 PGM3O95394 542 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 DHRS4L1P0CG22 281 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 BMP4P12644 408 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 IGHV1-2P23083 117 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 PTAFRP25105 342 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 MAP3K8P41279 467 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 PRIM2P49643 509 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 HTR6P50406 440 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 PRKAG1P54619 331 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 C2orf54Q08AI8 447 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 FOXF1Q12946 379 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 GGTLC2Q14390 218 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 TRADDQ15628 312 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 ARL13AQ5H913 290 aaPredicted RBP15.15■□□□□ 0.02
VIM-204ENST00000478746 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 KLHL17Q6TDP4 642 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 ZDHHC24Q6UX98 284 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 CEP70Q8NHQ1 597 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 FBXO27Q8NI29 283 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms