RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SSC4DQ8WTU2 575 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SMPDL3BQ92485 455 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 C1GALT1C1Q96EU7 318 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM19Q96HH6 336 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TRNT1Q96Q11 434 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 KLHDC3Q9BQ90 382 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SLC39A3Q9BRY0 314 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 UGT2B28Q9BY64 529 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SLC38A1Q9H2H9 487 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TP63Q9H3D4 680 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MRGBPQ9NV56 204 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 KCNE5Q9UJ90 142 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 LIPT1Q9Y234 373 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MEMO1Q9Y316 297 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 L3MBTL1Q9Y468 752 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 IGLV3-32A0A0A0MS00 114 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 TRBV5-3A0A0A0MS03 114 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 A1L4Q6 167 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 SERINC4A6NH21 518 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CLDN24A6NM45 220 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 EVPLLA8MZ36 301 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 C5orf58C9J3I9 102 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 H0Y3Z8 333 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 H3BML4 177 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 FBP2O00757 339 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 MRASO14807 208 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 SEC14L5O43304 696 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 ZIC3O60481 467 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CSTAP01040 98 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 LDLRP01130 860 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 POU3F2P20265 443 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 PPIBP23284 216 aaKnown RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 ACVR2AP27037 513 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 STARP49675 285 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CRISP3P54108 245 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 SELPLGQ14242 412 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 GCNT6Q5T4J0 391 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 AAGABQ6PD74 315 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 DLEU7Q6UYE1 221 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 LRRC74BQ6ZQY2 392 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 EIF3MQ7L2H7 374 aaKnown RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 MTERF4Q7Z6M4 381 aaKnown RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 UBQLNLQ8IYU4 475 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 C10orf111Q8N326 155 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 DPP10Q8N608 796 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 NFKBIDQ8NI38 313 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 SLC38A5Q8WUX1 472 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 WDR60Q8WVS4 1066 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 RELTQ969Z4 430 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 ZG16BQ96DA0 208 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CGREF1Q99674 301 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 TIMP4Q99727 224 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 TREX2Q9BQ50 279 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CPPED1Q9BRF8 314 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 THUMPD3Q9BV44 507 aaKnown RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CACYBPQ9HB71 228 aaKnown RBP6.25□□□□□ -1.41
BRCA1-215ENST00000478531 POLE3Q9NRF9 147 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 MED17Q9NVC6 651 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 CORO2BQ9UQ03 480 aa6.25□□□□□ -1.41
BRCA1-215ENST00000478531 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 OR2M5A3KFT3 312 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CLEC18AA5D8T8 446 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 BBIP1A8MTZ0 92 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF264O43296 627 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SNX3O60493 162 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CCDC22O60826 627 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 BCAS1O75363 584 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 IL7RP16871 459 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CALRP27797 417 aaKnown RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MSX1P28360 303 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MAGEA8P43361 318 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 GFRA1P56159 465 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 FOXF1Q12946 379 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SKP2Q13309 424 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CYLC2Q14093 348 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 GNA13Q14344 377 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 FGFBP1Q14512 234 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MAPK11Q15759 364 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF141Q15928 474 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CYP51A1Q16850 503 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TRMT5Q32P41 509 aaKnown RBP6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PLPPR5Q32ZL2 321 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 VASNQ6EMK4 673 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ENPP6Q6UWR7 440 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CLEC18BQ6UXF7 455 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RPTNQ6XPR3 784 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PEX5LQ8IYB4 626 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ULK2Q8IYT8 1036 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 EID3Q8N140 333 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 MARVELD2Q8N4S9 558 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 CLEC18CQ8NCF0 446 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 TSPEARQ8WU66 669 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RCN3Q96D15 328 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 RNF145Q96MT1 663 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 ANKRD27Q96NW4 1050 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 NPAS1Q99742 590 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 SPOCK3Q9BQ16 436 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PIGQQ9BRB3 760 aa6.24□□□□□ -1.41
BRCA1-215ENST00000478531 PIF1Q9H611 641 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms