RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CFDP1Q9UEE9 299 aaPredicted RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 UGT2A1Q9Y4X1 527 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 NPC1L1Q9UHC9 1359 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.06□□□□□ -2.24
HPS3-205ENST00000478525 TGDSO95455 350 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 APOA4P06727 396 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 COL8A2P25067 703 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 NPY1RP25929 384 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 ST3GAL3Q11203 375 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 UBE2V2Q15819 145 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 PVRIGQ6DKI7 326 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 LEG1Q6P5S2 330 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 C6orf89Q6UWU4 347 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 GBP6Q6ZN66 633 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 RFLNAQ6ZTI6 216 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 TMEM26Q6ZUK4 368 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 GDPD3Q7L5L3 318 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 GPBP1Q86WP2 473 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 CLYBLQ8N0X4 340 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 COLGALT1Q8NBJ5 622 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 TRUB1Q8WWH5 349 aaKnown RBP1.06□□□□□ -2.24
HPS3-205ENST00000478525 IL1F10Q8WWZ1 152 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 ART4Q93070 314 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 BAG1Q99933 345 aaPredicted RBP1.06□□□□□ -2.24
HPS3-205ENST00000478525 THUMPD3Q9BV44 507 aaKnown RBP1.06□□□□□ -2.24
HPS3-205ENST00000478525 DMAP1Q9NPF5 467 aaPredicted RBP1.06□□□□□ -2.24
HPS3-205ENST00000478525 AIG1Q9NVV5 245 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 TTC21BQ7Z4L5 1316 aa1.06□□□□□ -2.24
HPS3-205ENST00000478525 LOC100131303A0A0U1RQF7 123 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 FBLL1A6NHQ2 334 aaKnown RBP1.05□□□□□ -2.24
HPS3-205ENST00000478525 RPL36A-HNRNPH2H7BZ11 118 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 DKC1O60832 514 aaKnown RBP eCLIP1.05□□□□□ -2.24
HPS3-205ENST00000478525 TNFSF13O75888 250 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 SMSP52788 366 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 EFNB2P52799 333 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 WASHC5Q12768 1159 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 ZP4Q12836 540 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 CDKN3Q16667 212 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 KBTBD12Q3ZCT8 623 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 ANKRD20A4Q4UJ75 823 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 ANKRD20A2Q5SQ80 823 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 ANKRD20A1Q5TYW2 823 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 ANKRD20A3Q5VUR7 823 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 BNIPLQ7Z465 357 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 AMZ2Q86W34 360 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 DEPDC1BQ8WUY9 529 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 TMEM45BQ96B21 275 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 SRXN1Q9BYN0 137 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 IL1RAPL2Q9NP60 686 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 PAK1IP1Q9NWT1 392 aaPredicted RBP1.05□□□□□ -2.24
HPS3-205ENST00000478525 IGSF9BQ9UPX0 1349 aa1.05□□□□□ -2.24
HPS3-205ENST00000478525 SDK2Q58EX2 2172 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 H7C0S8 307 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 TLR4O00206 839 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 RNH1P13489 461 aaKnown RBP1.04□□□□□ -2.24
HPS3-205ENST00000478525 TMOD1P28289 359 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 ADSSP30520 456 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 GDI1P31150 447 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 PKN2Q16513 984 aaKnown RBP1.04□□□□□ -2.24
HPS3-205ENST00000478525 RAET1LQ5VY80 246 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 NANOGP8Q6NSW7 305 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 BTNL3Q6UXE8 466 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 EDEM3Q9BZQ6 932 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 IFI27L2Q9H2X8 130 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 FAM124BQ9H5Z6 455 aaPredicted RBP1.04□□□□□ -2.24
HPS3-205ENST00000478525 ZCCHC3Q9NUD5 404 aaKnown RBP1.04□□□□□ -2.24
HPS3-205ENST00000478525 DNAJB9Q9UBS3 223 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 GNPTGQ9UJJ9 305 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 SHROOM3Q8TF72 1996 aa1.04□□□□□ -2.24
HPS3-205ENST00000478525 SHANK1Q9Y566 2161 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 C7orf66A4D0T2 115 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 ANGPTL7O43827 346 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 SS18L1O75177 396 aaPredicted RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 SLITRK3O94933 977 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 SYNGR4O95473 234 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 GIPP09681 153 aaPredicted RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 PNMA6AP0CW24 399 aaPredicted RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 ALPPL2P10696 532 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 GCFC2P16383 781 aaKnown RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 CTNNA1P35221 906 aaKnown RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 EMDP50402 254 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 IGFBP7Q16270 282 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 MEP1BQ16820 701 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 ACSF3Q4G176 576 aaPredicted RBP1.03□□□□□ -2.24
HPS3-205ENST00000478525 SHISA6Q6ZSJ9 500 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 ARCQ7LC44 396 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 NAT8LQ8N9F0 302 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 OR8H1Q8NGG4 311 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 SELENOMQ8WWX9 145 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 CCDC51Q96ER9 411 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 CFAP36Q96G28 342 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 KCNA7Q96RP8 456 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 MCHR1Q99705 422 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 AP1M1Q9BXS5 423 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 ANGPTL2Q9UKU9 493 aa1.03□□□□□ -2.24
HPS3-205ENST00000478525 ESYT2A0FGR8 921 aa1.02□□□□□ -2.25
HPS3-205ENST00000478525 CACNB4O00305 520 aaPredicted RBP1.02□□□□□ -2.25
HPS3-205ENST00000478525 MSH4O15457 936 aa1.02□□□□□ -2.25
HPS3-205ENST00000478525 AKAP3O75969 853 aa1.02□□□□□ -2.25
HPS3-205ENST00000478525 VCLP18206 1134 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms