RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TRMT10BQ6PF06 316 aaKnown RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 RAD9BQ6WBX8 426 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 ZCCHC24Q8N2G6 241 aaKnown RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 TEX29Q8N6K0 151 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 SYT14Q8NB59 555 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 WDR20Q8TBZ3 569 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 ACTRT2Q8TDY3 377 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 NEU4Q8WWR8 484 aaPredicted RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF775Q96BV0 537 aaPredicted RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 TM4SF18Q96CE8 201 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 LRRC58Q96CX6 371 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 KLHDC3Q9BQ90 382 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 MCMBPQ9BTE3 642 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 RACGAP1Q9H0H5 632 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 RAB1BQ9H0U4 201 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 MMP27Q9H306 513 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 TSPY26PQ9H489 355 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 NTN4Q9HB63 628 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 POPDC3Q9HBV1 291 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 LPAR2Q9HBW0 351 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PPANQ9NQ55 473 aaKnown RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 G6PC2Q9NQR9 355 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PDP1Q9P0J1 537 aaPredicted RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 KLHL9Q9P2J3 617 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PSME2Q9UL46 239 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 MOKQ9UQ07 419 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 TRAF6Q9Y4K3 522 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PPIAL4AQ9Y536 164 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 CAPN6Q9Y6Q1 641 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 ARFGEF3Q5TH69 2177 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CIB4A0PJX0 185 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CCT8L1PA6NM43 557 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF724A8MTY0 619 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 LYNX1G3V0Z9 82 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 K7EPI3 171 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 PLOD3O60568 738 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 BANF1O75531 89 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 PNPP00491 289 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 IGFBP1P08833 259 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 NUDT17P0C025 328 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 LYNX1P0DP58 116 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 DDX5P17844 614 aaKnown RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 SFTPDP35247 375 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 MAPK12P53778 367 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 FOXG1P55316 489 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 RAB10P61026 200 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 PHEXP78562 749 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 SRSF4Q08170 494 aaKnown RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 RASGEF1BQ0VAM2 473 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 ADIPOQQ15848 244 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 GABRA6Q16445 453 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 OR7E24Q6IFN5 339 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 Q6ZPA2 131 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 C1QL2Q7Z5L3 287 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 MYLK4Q86YV6 388 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 C1QL4Q86Z23 238 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 BPIFB2Q8N4F0 458 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CDYL2Q8N8U2 506 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 TOR1AIP2Q8NFQ8 470 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 OR7G2Q8NG99 324 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 OR9A2Q8NGT5 310 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CLDND2Q8NHS1 167 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 UBASH3BQ8TF42 649 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 UBTD2Q8WUN7 234 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 WDR60Q8WVS4 1066 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC9A6Q92581 669 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 TAF15Q92804 592 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 KLHL29Q96CT2 875 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 UBXN10Q96LJ8 280 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF300Q96RE9 604 aaPredicted RBP6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 SERPINI1Q99574 410 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 NAT9Q9BTE0 207 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 TBL1XR1Q9BZK7 514 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 COQ10BQ9H8M1 238 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 ANKZF1Q9H8Y5 726 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 CA10Q9NS85 328 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 TAS2R9Q9NYW1 312 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF780BQ9Y6R6 833 aa6.36□□□□□ -1.39
SPTLC1-205ENST00000477888 IGHV3-15A0A0B4J1V0 119 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 TRAV20A0A0B4J274 112 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 ALG1L2C9J202 215 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 PDLIM1O00151 329 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 PHGDHO43175 533 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 UGDHO60701 494 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 CYTIPO60759 359 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 KERAO60938 352 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 GUCY1B2O75343 617 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 PDE5AO76074 875 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 IPO7O95373 1038 aaKnown RBP6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 UTS2O95399 124 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 IGHV3-9P01782 118 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 FGGP02679 453 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 OR4A8P0C604 315 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 LINGO3P0C6S8 592 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 GAAP10253 952 aa6.35□□□□□ -1.39
SPTLC1-205ENST00000477888 NTF4P34130 210 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms