RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ABCA12Q86UK0 2595 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 ZCCHC18P0CG32 403 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 CHRNB4P30926 498 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 CLDN18P56856 261 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTPN7-209ENST00000477554 LRIF1Q5T3J3 769 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 C16orf89Q6UX73 402 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 C6orf120Q7Z4R8 191 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 DHDDSQ86SQ9 333 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 IFNEQ86WN2 208 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 C9orf106Q8NAJ2 232 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 RELL2Q8NC24 303 aaPredicted RBP15.97■□□□□ 0.15
PTPN7-209ENST00000477554 TRIB1Q96RU8 372 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 HOPXQ9BPY8 73 aaPredicted RBP15.97■□□□□ 0.15
PTPN7-209ENST00000477554 ACTRT3Q9BYD9 372 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 PIGUQ9H490 435 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 SLC6A13Q9NSD5 602 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 COQ3Q9NZJ6 369 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 ABCG2Q9UNQ0 655 aa15.97■□□□□ 0.15
PTPN7-209ENST00000477554 INTS1Q8N201 2190 aaKnown RBP15.97■□□□□ 0.15
PTPN7-209ENST00000477554 PDZD2O15018 2839 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 AKAP9Q99996 3911 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 RNF103-CHMP3A0A140T963 221 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 HK1P19367 917 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 PRIM2P49643 509 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 SUCLG1P53597 346 aaKnown RBP15.96■□□□□ 0.15
PTPN7-209ENST00000477554 POU6F2P78424 691 aaPredicted RBP15.96■□□□□ 0.15
PTPN7-209ENST00000477554 DLEU7Q6UYE1 221 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 ZNF621Q6ZSS3 439 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 HMGN2P46Q86SG4 172 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 ACBD4Q8NC06 268 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 SFXN5Q8TD22 340 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 LRRC58Q96CX6 371 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 C1GALT1C1Q96EU7 318 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 SH3YL1Q96HL8 342 aaPredicted RBP15.96■□□□□ 0.15
PTPN7-209ENST00000477554 SFXN2Q96NB2 322 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 BTBD2Q9BX70 525 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 TBL1XR1Q9BZK7 514 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 TRIM8Q9BZR9 551 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 PAIP1Q9H074 479 aaKnown RBP15.96■□□□□ 0.15
PTPN7-209ENST00000477554 KCNE5Q9UJ90 142 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 ZNF337Q9Y3M9 751 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 PCDHB14Q9Y5E9 798 aa15.96■□□□□ 0.15
PTPN7-209ENST00000477554 PRAMEF27A3QJZ7 478 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 EPPINO95925 133 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 OPN1LWP04000 364 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 GABRA1P14867 456 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 TBXA2RP21731 343 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 ZNF136P52737 540 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 PSPHP78330 225 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 FUT5Q11128 374 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 FOXF2Q12947 444 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 DCST2Q5T1A1 773 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 ZCCHC12Q6PEW1 402 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 MCEMP1Q8IX19 187 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 EID3Q8N140 333 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 OR56A1Q8NGH5 318 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 RAB8BQ92930 207 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 MOAP1Q96BY2 351 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 STACQ99469 402 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 CGREF1Q99674 301 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 DUSP22Q9NRW4 184 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 SLAMF8Q9P0V8 285 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 VDAC3Q9Y277 283 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 MED12LQ86YW9 2145 aa15.95■□□□□ 0.14
PTPN7-209ENST00000477554 IGLV3-32A0A0A0MS00 114 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 AHRRA9YTQ3 701 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ALG1L2C9J202 215 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 HNRNPRO43390 633 aaKnown RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 FCMRO60667 390 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 BCAS1O75363 584 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 GSNP06396 782 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 IL11P20809 199 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 UQCRC2P22695 453 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 CEACAM8P31997 349 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 DLX5P56178 289 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 DSCR4P56555 118 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 CLDN20P56880 219 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 KRTAP10-9P60411 292 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 DNAL1Q4LDG9 190 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 RIPPLY2Q5TAB7 128 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 TNFAIP8L2Q6P589 184 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 BHLHB9Q6PI77 547 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 CBLN3Q6UW01 205 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 DNAJC14Q6Y2X3 702 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 RINLQ6ZS11 566 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ARPINQ7Z6K5 226 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 ADGRE4PQ86SQ3 457 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 UBQLNLQ8IYU4 475 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 PGAM4Q8N0Y7 254 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 RBM15BQ8NDT2 890 aaKnown RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 SLC7A6OSQ96CW6 309 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 SH3GL1Q99961 368 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 BTBD10Q9BSF8 475 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 OR51I1Q9H343 314 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 TAS2R1Q9NYW7 299 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 VAPAQ9P0L0 249 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-209ENST00000477554 OR2M5A3KFT3 312 aa15.94■□□□□ 0.14
PTPN7-209ENST00000477554 TTC36A6NLP5 189 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms