RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ZNF555Q8NEP9 628 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 OR11G2Q8NGC1 345 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 OR8K3Q8NH51 312 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM255BQ8WV15 326 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 UBE2FQ969M7 185 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 HOXD1Q9GZZ0 328 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 ARMC7Q9H6L4 198 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 POFUT2Q9Y2G5 429 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.29
COL4A6-206ENST00000477085 CUL9Q8IWT3 2517 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 TRAPPC13A5PLN9 417 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 PROB1E7EW31 1015 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 TERTO14746 1132 aaKnown RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 BCKDKO14874 412 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 FOXD2O60548 495 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 RAB40ALP0C0E4 278 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 CDK4P11802 303 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 FOLR3P41439 243 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 LIMK1P53667 647 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 PNLIPRP2P54317 469 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 C1orf94Q6P1W5 598 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 PPP1R32Q7Z5V6 425 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 CMIPQ8IY22 773 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 NR4A3Q92570 626 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 DGCR6LQ9BY27 220 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 ANKRD19PQ9H560 264 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 ZBTB20Q9HC78 741 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 AASSQ9UDR5 926 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 TESQ9UGI8 421 aaKnown RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 MRTO4Q9UKD2 239 aaKnown RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 MGAT4BQ9UQ53 548 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
COL4A6-206ENST00000477085 NPFFR2Q9Y5X5 522 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 PCSK5Q92824 1860 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 SDK2Q58EX2 2172 aa13.26□□□□□ -0.29
COL4A6-206ENST00000477085 A0A1W2PQ72 361 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 H3BNH8 94 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SCDO00767 359 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 PIP5K1CO60331 668 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ZFAND5O76080 213 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ADAP00813 363 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ELK4P28324 431 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 IL12BP29460 328 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 OMPP47874 163 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SKP2Q13309 424 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 BLMHQ13867 455 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 BTBD16Q32M84 506 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM154Q6P9G4 183 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 MARCH3Q86UD3 253 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 APLFQ8IW19 511 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 PARP8Q8N3A8 854 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 LSMEM1Q8N8F7 131 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 POGLUT1Q8NBL1 392 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 FBLIM1Q8WUP2 373 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SLC38A4Q969I6 547 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 PITX2Q99697 317 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF559Q9BR84 538 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 UCK2Q9BZX2 261 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 A0A0B4J2E0 115 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 A0A1B0GWA3 101 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 A0A1B0GX12 115 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 OR6C70A6NIJ9 312 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 FADS1O60427 444 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 MAN1A2O60476 641 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SMIM18P0DKX4 95 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 CHMP24386 653 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 LCN1P31025 176 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 RYKP34925 604 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 FBXW4P57775 412 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 CD47Q08722 323 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 KEAP1Q14145 624 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 MEP1AQ16819 746 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM164Q5U3C3 297 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 THAP5Q7Z6K1 395 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 C8orf59Q8N0T1 100 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF527Q8NB42 609 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 PHOSPHO1Q8TCT1 267 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 GRHL3Q8TE85 626 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ACOT11Q8WXI4 607 aaPredicted RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SLC35B4Q969S0 331 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 POLR2J2Q9GZM3 115 aaKnown RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 POLR2J3Q9H1A7 115 aaKnown RBP13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF696Q9H7X3 374 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 EVA1AQ9H8M9 152 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF556Q9HAH1 456 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 SLC35A3Q9Y2D2 325 aa13.25□□□□□ -0.29
COL4A6-206ENST00000477085 ALG1L2C9J202 215 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 KLF4O43474 513 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 PPM1BO75688 479 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 OR2J2O76002 312 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 NGFRP08138 427 aa13.24□□□□□ -0.29
COL4A6-206ENST00000477085 CDH2P19022 906 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms