RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 CNEP1R1Q8N9A8 125 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 CHDHQ8NE62 594 aaPredicted RBP9.22□□□□□ -0.93
CCM2-208ENST00000476594 MIPOL1Q8TD10 442 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 ZBTB9Q96C00 473 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 ATP6V1G3Q96LB4 118 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 CCDC115Q96NT0 180 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 OR52E6Q96RD3 313 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 SH3GL2Q99962 352 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 SLC35A5Q9BS91 424 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 RBM24Q9BX46 236 aaKnown RBP9.22□□□□□ -0.93
CCM2-208ENST00000476594 NMUR2Q9GZQ4 415 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 GLRX2Q9NS18 164 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 MED17Q9NVC6 651 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 NDRG3Q9UGV2 375 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 EMC9Q9Y3B6 208 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 L3MBTL1Q9Y468 752 aa9.22□□□□□ -0.93
CCM2-208ENST00000476594 GPC6Q9Y625 555 aaPredicted RBP9.22□□□□□ -0.93
CCM2-208ENST00000476594 APCP25054 2843 aa9.21□□□□□ -0.93
CCM2-208ENST00000476594 HCFC1P51610 2035 aa9.21□□□□□ -0.93
CCM2-208ENST00000476594 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 TMEM247A6NEH6 219 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 HMGB1P1B2RPK0 211 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 MSTNO14793 375 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 UBDO15205 165 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 POLR3GO15318 223 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 ZNF264O43296 627 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 TGDSO95455 350 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 KRT75O95678 551 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 GUSBP08236 651 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 CCR4P51679 360 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 CTBP2P56545 445 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 WNT3P56703 355 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 CLDN15P56746 228 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 IRX1P78414 480 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 PON3Q15166 354 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 GPR68Q15743 365 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 PLPPR5Q32ZL2 321 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 ARHGAP11BQ3KRB8 267 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 PDCD4Q53EL6 469 aaKnown RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 KLHL26Q53HC5 615 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 MSANTD1Q6ZTZ1 278 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 EIF3MQ7L2H7 374 aaKnown RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 CDH24Q86UP0 819 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 ANKRD46Q86W74 232 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 OR5D16Q8NGK9 328 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 XAGE5Q8WWM1 108 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 TMEM234Q8WY98 164 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 ZNF75CPQ92670 426 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 PMM1Q92871 262 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 NEURL3Q96EH8 262 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 RNF145Q96MT1 663 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 C7orf26Q96N11 449 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 SDF2Q99470 211 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 SLC39A3Q9BRY0 314 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 RTN4RQ9BZR6 473 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 OR51I1Q9H343 314 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 WDR55Q9H6Y2 383 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 VIPAS39Q9H9C1 493 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 ZIM2Q9NZV7 527 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 LIPT1Q9Y234 373 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 SLC35A3Q9Y2D2 325 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 WDR45Q9Y484 360 aa9.21□□□□□ -0.94
CCM2-208ENST00000476594 SPIN1Q9Y657 262 aaPredicted RBP9.21□□□□□ -0.94
CCM2-208ENST00000476594 A0A1W2PNV4 684 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 SERINC4A6NH21 518 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 RFXANKO14593 260 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 CASKO14936 926 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 ANKRD28O15084 1053 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 DIAPH2O60879 1101 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 SLC22A3O75751 556 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCM2-208ENST00000476594 CSTAP01040 98 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 ALDOCP09972 364 aaKnown RBP9.2□□□□□ -0.94
CCM2-208ENST00000476594 UQCRBP14927 111 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 PGCP20142 388 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 SLC7A1P30825 629 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 CPOXP36551 454 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 KCNJ5P48544 419 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 PCYT1AP49585 367 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 AGFG1P52594 562 aaKnown RBP9.2□□□□□ -0.94
CCM2-208ENST00000476594 NME5P56597 212 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 UFM1P61960 85 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 RPS26P62854 115 aaKnown RBP9.2□□□□□ -0.94
CCM2-208ENST00000476594 ZNF117Q03924 483 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 CD226Q15762 336 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 ZNF141Q15928 474 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 TMEM44Q2T9K0 475 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 GPAT3Q53EU6 434 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 SAXO2Q658L1 398 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 TNFAIP8L2Q6P589 184 aaPredicted RBP9.2□□□□□ -0.94
CCM2-208ENST00000476594 ZNF621Q6ZSS3 439 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 LUZP2Q86TE4 346 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 STK32CQ86UX6 486 aa9.2□□□□□ -0.94
CCM2-208ENST00000476594 ZZZ3Q8IYH5 903 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms