RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NUDT21O43809 227 aaKnown RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 XCR1P46094 333 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 DSCR10P59022 87 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 RAB40BQ12829 278 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 NDUFA9Q16795 377 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 GLYR1Q49A26 553 aaPredicted RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 PAN3Q58A45 887 aaKnown RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 FAHD2BQ6P2I3 314 aaPredicted RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 TMEM110Q86TL2 294 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 CDC20BQ86Y33 519 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 SLC38A6Q8IZM9 456 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 C15orf54Q8N8G6 183 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 CCDC26Q8TAB7 109 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 EMG1Q92979 244 aaKnown RBP4.48□□□□□ -1.69
VPS50-212ENST00000476413 PELI1Q96FA3 418 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 FAHD2AQ96GK7 314 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 PPDPFQ9H3Y8 114 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 SPRR3Q9UBC9 169 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 RIMS3Q9UJD0 308 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 OARD1Q9Y530 152 aa4.48□□□□□ -1.69
VPS50-212ENST00000476413 PRRG1O14668 218 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 MSH4O15457 936 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 SNNO75324 88 aaPredicted RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 MTX2O75431 263 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 MXD4Q14582 209 aaPredicted RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 C10orf120Q5SQS8 335 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 ATF7IP2Q5U623 682 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 PAMR1Q6UXH9 720 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 APTXQ7Z2E3 356 aaKnown RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 MARCH9Q86YJ5 346 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 MCOLN2Q8IZK6 566 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 SYT14Q8NB59 555 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 AENQ8WTP8 325 aaKnown RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 TRUB1Q8WWH5 349 aaKnown RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 BADQ92934 168 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 SH3YL1Q96HL8 342 aaPredicted RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 EDEM2Q9BV94 578 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 PAK1IP1Q9NWT1 392 aaPredicted RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 PIPOXQ9P0Z9 390 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 RSPH14Q9UHP6 348 aa4.47□□□□□ -1.69
VPS50-212ENST00000476413 DDX49Q9Y6V7 483 aaKnown RBP4.47□□□□□ -1.69
VPS50-212ENST00000476413 KIF16BQ96L93 1317 aa4.46□□□□□ -1.69
VPS50-212ENST00000476413 PP2D1A8MPX8 630 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 E9PLD3 99 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 G3V4G9 280 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 CXCL11O14625 94 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 ARPC3O15145 178 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 GPAA1O43292 621 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 RIPK2O43353 540 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 RHOBTB1O94844 696 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 LAP3P28838 519 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 CD80P33681 288 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 FNTAP49354 379 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 SLC25A1P53007 311 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 SERTAD2Q14140 314 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 ATAD3CQ5T2N8 411 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 SLC22A10Q63ZE4 541 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 CENPPQ6IPU0 288 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 FAM199XQ6PEV8 388 aaPredicted RBP4.46□□□□□ -1.7
VPS50-212ENST00000476413 KDELC1Q6UW63 502 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 C2orf66Q6UXQ4 117 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 ACOT1Q86TX2 421 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 HPS6Q86YV9 775 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 GPR137CQ8N3F9 429 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 ZCCHC7Q8N3Z6 543 aaKnown RBP4.46□□□□□ -1.7
VPS50-212ENST00000476413 IL1F10Q8WWZ1 152 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 PIGCQ92535 297 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 PSMG2Q969U7 264 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 VSIG2Q96IQ7 327 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 CELF6Q96J87 481 aaKnown RBP4.46□□□□□ -1.7
VPS50-212ENST00000476413 PSKH2Q96QS6 385 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 TSSK1BQ9BXA7 367 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 GLT8D2Q9H1C3 349 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 CAB39LQ9H9S4 337 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 Q9UF83 564 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 ANGPTL2Q9UKU9 493 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 RASD1Q9Y272 281 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 NAALAD2Q9Y3Q0 740 aa4.46□□□□□ -1.7
VPS50-212ENST00000476413 LOC100131303A0A0U1RQF7 123 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 CLRN2A0PK11 232 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 NPIPA7E9PJI5 369 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 GPX5O75715 221 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 THY1P04216 161 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 H2BFMP0C1H6 154 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 NPIPA8P0DM63 369 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 CYP2B6P20813 491 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 NF2P35240 595 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 MDH2P40926 338 aaKnown RBP4.45□□□□□ -1.7
VPS50-212ENST00000476413 P2RY1P47900 373 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 AP3M2P53677 418 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 ASAH1Q13510 395 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 ZNF679Q8IYX0 411 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 TMEM123Q8N131 208 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 STXBP6Q8NFX7 210 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 OR4D5Q8NGN0 318 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 OR1F12Q8NHA8 337 aa4.45□□□□□ -1.7
VPS50-212ENST00000476413 TRMT10AQ8TBZ6 339 aaKnown RBP4.45□□□□□ -1.7
VPS50-212ENST00000476413 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms