RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CMIPQ8IY22 773 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 ANGPT4Q9Y264 503 aa26.85■■□□□ 1.89
HOXB3-208ENST00000476342 SUMO3P55854 103 aaPredicted RBP26.84■■□□□ 1.89
HOXB3-208ENST00000476342 KCNJ10P78508 379 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 ADRM1Q16186 407 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 EIF2S3LQ2VIR3 472 aaKnown RBP26.84■■□□□ 1.89
HOXB3-208ENST00000476342 NET1Q7Z628 596 aaPredicted RBP26.84■■□□□ 1.89
HOXB3-208ENST00000476342 HMGN2P46Q86SG4 172 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 CHERPQ8IWX8 916 aaKnown RBP26.84■■□□□ 1.89
HOXB3-208ENST00000476342 TMCO5AQ8N6Q1 288 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 PRR7Q8TB68 274 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 HOPXQ9BPY8 73 aaPredicted RBP26.84■■□□□ 1.89
HOXB3-208ENST00000476342 OSGIN2Q9Y236 505 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 ZNF835Q9Y2P0 537 aa26.84■■□□□ 1.89
HOXB3-208ENST00000476342 RELNP78509 3460 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 FAM47E-STBD1D6RA91 191 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 PRRG2O14669 202 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 PGM3O95394 542 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 HK1P19367 917 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 ZNF41P51814 821 aaPredicted RBP26.83■■□□□ 1.89
HOXB3-208ENST00000476342 CASP6P55212 293 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 LIN52Q52LA3 116 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 CBLN3Q6UW01 205 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 FGD2Q7Z6J4 655 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 HIPK4Q8NE63 616 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 TOR1AIP2Q8NFQ8 470 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 OR52P1PQ8NH57 321 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 LAT2Q9GZY6 243 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 TAGLN3Q9UI15 199 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 ICAM5Q9UMF0 924 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 AP3M1Q9Y2T2 418 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 IFT52Q9Y366 437 aa26.83■■□□□ 1.89
HOXB3-208ENST00000476342 MYO18BQ8IUG5 2567 aa26.83■■□□□ 1.88
HOXB3-208ENST00000476342 A0A087WZY1 265 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NPIPA2E9PIF3 369 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NPIPA3F8WFD2 350 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 BCKDKO14874 412 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NUDT14O95848 222 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 UBTFL6P0CB48 400 aaPredicted RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NID1P14543 1247 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ETS2P15036 469 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 LARS2Q15031 903 aaKnown RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NHSL2Q5HYW2 709 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 Q6ZPB1 254 aaPredicted RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 KRT73Q86Y46 540 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 PTOV1Q86YD1 416 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 SLC30A8Q8IWU4 369 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 FITM2Q8N6M3 262 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 FAM57AQ8TBR7 257 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 GPATCH1Q9BRR8 931 aaKnown RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ZNF232Q9UNY5 417 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 VDAC3Q9Y277 283 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 RPH3AQ9Y2J0 694 aaPredicted RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 SLC6A5Q9Y345 797 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ZIC3O60481 467 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 CYP7B1O75881 506 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 TPOP07202 933 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 THBS1P07996 1170 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 STSP08842 583 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 PGM1P36871 562 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 CCR4P51679 360 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 SKP2Q13309 424 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 CBFBQ13951 182 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 NDUFAF6Q330K2 333 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 GLYR1Q49A26 553 aaPredicted RBP26.82■■□□□ 1.88
HOXB3-208ENST00000476342 RAET1LQ5VY80 246 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 AAGABQ6PD74 315 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 FAM71CQ8NEG0 241 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 SFXN2Q96NB2 322 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ARMC7Q9H6L4 198 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 SPRR3Q9UBC9 169 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ACAD8Q9UKU7 415 aa26.82■■□□□ 1.88
HOXB3-208ENST00000476342 ZNHIT1O43257 154 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 KRT72Q14CN4 511 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 ARSKQ6UWY0 536 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 ZZZ3Q8IYH5 903 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 OR5W2Q8NH69 310 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 ZNF607Q96SK3 696 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 PIGQQ9BRB3 760 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 SPATA5L1Q9BVQ7 753 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 ARL8BQ9NVJ2 186 aa26.81■■□□□ 1.88
HOXB3-208ENST00000476342 HEATR5AQ86XA9 2040 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 OIP5O43482 229 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 ACTL6AO96019 429 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 TCEA1P23193 301 aaKnown RBP26.8■■□□□ 1.88
HOXB3-208ENST00000476342 CPA2P48052 419 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 GZMMP51124 257 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 ZSWIM7Q19AV6 140 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 WLSQ5T9L3 541 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 CD163Q86VB7 1156 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 VRK2Q86Y07 508 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 ABTB1Q969K4 478 aaPredicted RBP26.8■■□□□ 1.88
HOXB3-208ENST00000476342 ZBTB8AQ96BR9 441 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 PIF1Q9H611 641 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 EXOSC3Q9NQT5 275 aaKnown RBP26.8■■□□□ 1.88
HOXB3-208ENST00000476342 MED17Q9NVC6 651 aa26.8■■□□□ 1.88
HOXB3-208ENST00000476342 ZNF443Q9Y2A4 671 aaPredicted RBP26.8■■□□□ 1.88
HOXB3-208ENST00000476342 TRGV8A0A0C4DH27 118 aa26.79■■□□□ 1.88
HOXB3-208ENST00000476342 CLDN24A6NM45 220 aa26.79■■□□□ 1.88
HOXB3-208ENST00000476342 PABPC4LP0CB38 370 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms