RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZBTB9Q96C00 473 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CAPNS2Q96L46 248 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 PANX2Q96RD6 677 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 MEIS3Q99687 375 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TMEM121Q9BTD3 319 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GPR174Q9BXC1 333 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 DUSP16Q9BY84 665 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 AZI2Q9H6S1 392 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CCNB1IP1Q9NPC3 277 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TUBG2Q9NRH3 451 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 MAN2C1Q9NTJ4 1040 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 C20orf96Q9NUD7 363 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TAAR2Q9P1P5 351 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 PEF1Q9UBV8 284 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 SEC14L4Q9UDX3 406 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CYTH4Q9UIA0 394 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TCF19Q9Y242 345 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 POLDIP2Q9Y2S7 368 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CSDC2Q9Y534 153 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CENPJQ9HC77 1338 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GOLGA3Q08378 1498 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 KDM5BQ9UGL1 1544 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 IQGAP2Q13576 1575 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 DOCK7Q96N67 2140 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 A0A0A6YYD4 124 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NPIPA5A0A0B4J1W7 369 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF840PA6NDX5 716 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OR6C65A6NJZ3 312 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 HHLA1C9JL84 531 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NPIPA5E9PKD4 350 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF701M0R085 212 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 INPP4BO15327 924 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 INSIG1O15503 277 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NMT2O60551 498 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 TOXO94900 526 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NTN1O95631 604 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 TGM6O95932 706 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OAS1P00973 400 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ATP1A1P05023 1023 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 IVLP07476 585 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 HBQ1P09105 142 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 H2BFMP0C1H6 154 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF24P17028 368 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 XRCC1P18887 633 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 EDNRAP25101 427 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 GCAP28676 217 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 GTF2E2P29084 291 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RPL9P32969 192 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SAA4P35542 130 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NAMPTP43490 491 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZFP36L2P47974 494 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 LEPRP48357 1165 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RAB9AP51151 201 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 PLP1P60201 277 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RAB11AP62491 216 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 PLOD1Q02809 727 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RIGQ13278 110 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 MAB21L1Q13394 359 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 C1orf61Q13536 156 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 GK3PQ14409 553 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 TMEM187Q14656 261 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RBBP5Q15291 538 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RAB11BQ15907 218 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ECSCRQ19T08 205 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 KRT71Q3SY84 523 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OTUD3Q5T2D3 398 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OR8G2PQ6IF36 304 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SLC8B1Q6J4K2 584 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 RHBDD2Q6NTF9 364 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SPSB3Q6PJ21 355 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SLC25A47Q6Q0C1 308 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 LINC00523Q86TU6 105 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 NFE4Q86UQ8 179 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ERI1Q8IV48 349 aaKnown RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SYCE1Q8N0S2 351 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 GABRG1Q8N1C3 465 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 MARVELD2Q8N4S9 558 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ATP6V0D2Q8N8Y2 350 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 TMEM178AQ8NBL3 297 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OR2L3Q8NG85 312 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 OR10A7Q8NGE5 316 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 LMO3Q8TAP4 145 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 GLYATL2Q8WU03 294 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SMAP2Q8WU79 429 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 MITD1Q8WV92 249 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 DYRK2Q92630 601 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF707Q96C28 371 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 BIRC7Q96CA5 298 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF486Q96H40 463 aaPredicted RBP3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SERAC1Q96JX3 654 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 MTMR9Q96QG7 549 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 CLCC1Q96S66 551 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 FEM1AQ9BSK4 669 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SPATA16Q9BXB7 569 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SLITRK2Q9H156 845 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 Q9HAA7 133 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 SIX2Q9NPC8 291 aa3.59□□□□□ -1.83
VPS13D-207ENST00000476169 PNO1Q9NRX1 252 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms