RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ZNF556Q9HAH1 456 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 TMEM27Q9HBJ8 222 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SELENONQ9NZV5 590 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CTSFQ9UBX1 484 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 RAB26Q9ULW5 256 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 ABCG2Q9UNQ0 655 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 POLHQ9Y253 713 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 YARS2Q9Y2Z4 477 aaKnown RBP6.47□□□□□ -1.37
SHQ1-207ENST00000475558 SH3GLB1Q9Y371 365 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 DTNAQ9Y4J8 743 aa6.47□□□□□ -1.37
SHQ1-207ENST00000475558 CENPEQ02224 2701 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 IGHV1-45A0A0A0MS14 117 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 A0A1W2PRQ8 180 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ARRDC5A6NEK1 342 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 A8MUA0 341 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TGFBR3LH3BV60 316 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 K7EM74 188 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 GTPBP1O00178 669 aaKnown RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TNFRSF11BO00300 401 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SCDO00767 359 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 KIAA0513O60268 411 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 FCMRO60667 390 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 REM1O75628 298 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TIPRLO75663 272 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 RASAL1O95294 804 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 HPP00738 406 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SEMG1P04279 462 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CHRM4P08173 479 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF28P17035 718 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CD247P20963 164 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 IL12BP29460 328 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 AQP1P29972 269 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SOX18P35713 384 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SOX11P35716 441 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 DLSTP36957 453 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 UQCRFS1P47985 274 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 RRADP55042 308 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CASP9P55211 416 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 COPZ1P61923 177 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SNRPNP63162 240 aaKnown RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SNTA1Q13424 505 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 DNASE1L3Q13609 305 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 DGCR6Q14129 220 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 EBPQ15125 230 aaKnown RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 MAPK11Q15759 364 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 KLHL26Q53HC5 615 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CMPK2Q5EBM0 449 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 WLSQ5T9L3 541 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TTC23Q5W5X9 447 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM81Q6P7N7 255 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF613Q6PF04 617 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 FAM198BQ6UWH4 519 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ENPP6Q6UWR7 440 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 FRRS1Q6ZNA5 592 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 DGAT2L6Q6ZPD8 337 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CARM1Q86X55 608 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 APLFQ8IW19 511 aaPredicted RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 PRSS58Q8IYP2 241 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CDK20Q8IZL9 346 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ARMC10Q8N2F6 343 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 C10orf111Q8N326 155 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SVOPQ8N4V2 548 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SLC5A8Q8N695 610 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 BCORP1Q8N888 145 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 CPT1CQ8TCG5 803 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ELP5Q8TE02 316 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 PHF10Q8WUB8 498 aaKnown RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 DNAJA4Q8WW22 397 aaPredicted RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 TSLPQ969D9 159 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SLC38A4Q969I6 547 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 MPP4Q96JB8 637 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SGCZQ96LD1 299 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF184Q99676 751 aaPredicted RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ARHGDIGQ99819 225 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 NUDT9Q9BW91 350 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 OSBPL11Q9BXB4 747 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 SERHL2Q9H4I8 314 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 EXOSC3Q9NQT5 275 aaKnown RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 NDUFAF4Q9P032 175 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 ABI3Q9P2A4 366 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 MYOTQ9UBF9 498 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 NKX1-2Q9UD57 310 aaPredicted RBP6.46□□□□□ -1.38
SHQ1-207ENST00000475558 RIMS3Q9UJD0 308 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 MKLN1Q9UL63 735 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 USP22Q9UPT9 525 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 NPFFR2Q9Y5X5 522 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 HIVEP3Q5T1R4 2406 aa6.46□□□□□ -1.38
SHQ1-207ENST00000475558 HEATR5BQ9P2D3 2071 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 A0A1W2PS29 197 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 CDHR4A6H8M9 788 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 SERINC4A6NH21 518 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 NPIPB9F8W1W9 429 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 H0YAE9 185 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 FAAHO00519 579 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 UGT2B11O75310 529 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 PPM1BO75688 479 aa6.45□□□□□ -1.38
SHQ1-207ENST00000475558 UGT2B17O75795 530 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms