RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 INTS12Q96CB8 462 aaKnown RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 LRRC46Q96FV0 321 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 RNF145Q96MT1 663 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 ZFP3Q96NJ6 502 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 TREX2Q9BQ50 279 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-223ENST00000475146 KLHDC3Q9BQ90 382 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 NMUR2Q9GZQ4 415 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 ZNF350Q9GZX5 532 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 TCF7L2Q9NQB0 619 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 STOML1Q9UBI4 398 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 MKLN1Q9UL63 735 aa21.67■■□□□ 1.06
CPNE1-223ENST00000475146 SLC22A20A6NK97 555 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 EEF1E1-BLOC1S5C9J1V9 151 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 RFXANKO14593 260 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 EEF1E1O43324 174 aaKnown RBP21.66■■□□□ 1.06
CPNE1-223ENST00000475146 OIP5O43482 229 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 RCBTB2O95199 551 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 TGDSO95455 350 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 SSTR2P30874 369 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 CLDN15P56746 228 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 STX1BP61266 288 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 FOXF2Q12947 444 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 HEPHL1Q6MZM0 1159 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 POMZP3Q6PJE2 187 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 DMRTC2Q8IXT2 367 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-223ENST00000475146 GTPBP8Q8N3Z3 284 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-223ENST00000475146 TMCO5AQ8N6Q1 288 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 OR9I1Q8NGQ6 314 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 RFWD2Q8NHY2 731 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 NPAS1Q99742 590 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 PINK1Q9BXM7 581 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 ACBD3Q9H3P7 528 aa21.66■■□□□ 1.06
CPNE1-223ENST00000475146 C7orf72A4D263 438 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 FCMRO60667 390 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 TGM6O95932 706 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 IL18BPO95998 194 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 C1QCP02747 245 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 UBL4AP11441 157 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 IDH3AP50213 366 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 P2RX1P51575 399 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 CCR4P51679 360 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 SUMO3P55854 103 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-223ENST00000475146 RPS3AP61247 264 aaKnown RBP21.65■■□□□ 1.06
CPNE1-223ENST00000475146 HPCAP84074 193 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 TIGD2Q4W5G0 525 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 CBLN3Q6UW01 205 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 ROPN1LQ96C74 230 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 SFXN3Q9BWM7 321 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 RMND5AQ9H871 391 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 WDR45Q9Y484 360 aa21.65■■□□□ 1.06
CPNE1-223ENST00000475146 CRYBG3Q68DQ2 2970 aa21.64■■□□□ 1.06
CPNE1-223ENST00000475146 SERINC4A6NH21 518 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 EIF1AYO14602 144 aaKnown RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 ANP32DO95626 131 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 ANXA11P50995 505 aaKnown RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 POLR2JP52435 117 aaKnown RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 AQP5P55064 265 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 DLX5P56178 289 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 FOXF1Q12946 379 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 ZNF141Q15928 474 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 SGCBQ16585 318 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 GPAT3Q53EU6 434 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 PNPT1Q8TCS8 783 aaKnown RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 CKAP2Q8WWK9 683 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 FIG4Q92562 907 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 RNASE6Q93091 150 aaKnown RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 C14orf79Q96F83 325 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 ZNF845Q96IR2 970 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-223ENST00000475146 EBF4Q9BQW3 602 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 TMEM185BQ9H7F4 350 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 POLE3Q9NRF9 147 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 ICAM5Q9UMF0 924 aa21.64■■□□□ 1.05
CPNE1-223ENST00000475146 CENPEQ02224 2701 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 CENPVL1A0A0U1RR11 272 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 ZNF264O43296 627 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 KIAA0513O60268 411 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 UGT2B17O75795 530 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 CYP7B1O75881 506 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 LINGO3P0C6S8 592 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 ME2P23368 584 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 EIF1AXP47813 144 aaKnown RBP21.63■■□□□ 1.05
CPNE1-223ENST00000475146 TLE4Q04727 773 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 FUT5Q11128 374 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 MYBPHQ13203 477 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 SNTB1Q13884 538 aaKnown RBP21.63■■□□□ 1.05
CPNE1-223ENST00000475146 PPP4R4Q6NUP7 873 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 GGNQ86UU5 652 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 METTL25Q8N6Q8 603 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 POC1BQ8TC44 478 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 ITCHQ96J02 903 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 MAGEB18Q96M61 343 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 CCDC28BQ9BUN5 200 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 KCNE5Q9UJ90 142 aa21.63■■□□□ 1.05
CPNE1-223ENST00000475146 CELSR2Q9HCU4 2923 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 FAM234BA2RU67 622 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 SYT5O00445 386 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 HMGN4O00479 90 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 KRT75O95678 551 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 OPN1LWP04000 364 aa21.62■■□□□ 1.05
CPNE1-223ENST00000475146 PSMA4P25789 261 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms