RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DCTN4Q9UJW0 460 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 TRIM33Q9UPN9 1127 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 MRPS18CQ9Y3D5 142 aaKnown RBP13.68□□□□□ -0.22
VARS-223ENST00000474643 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
VARS-223ENST00000474643 SOX30O94993 753 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 UTS2O95399 124 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 ANP32DO95626 131 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 FAM107AO95990 144 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 CD99P14209 185 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 DRD4P21917 467 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 MATN1P21941 496 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 UQCRC2P22695 453 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 IL12AP29459 219 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 KCNJ5P48544 419 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 POLR2JP52435 117 aaKnown RBP13.67□□□□□ -0.22
VARS-223ENST00000474643 RPS3AP61247 264 aaKnown RBP13.67□□□□□ -0.22
VARS-223ENST00000474643 LRRC74AQ0VAA2 488 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 FOXF2Q12947 444 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 SGCBQ16585 318 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 PLXDC2Q6UX71 529 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 C6orf120Q7Z4R8 191 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 STACQ99469 402 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 FOXC2Q99958 501 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 PIGQQ9BRB3 760 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 G6PC3Q9BUM1 346 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 BTBD2Q9BX70 525 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 PRRG4Q9BZD6 226 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 PIGUQ9H490 435 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 HHATLQ9HCP6 504 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 DUSP22Q9NRW4 184 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 BTNL2Q9UIR0 455 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 HIVEP1P15822 2718 aa13.67□□□□□ -0.22
VARS-223ENST00000474643 A0A0G2JND7 137 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 SH3D21A4FU49 640 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 LINC01387J3KSC0 135 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 RFXANKO14593 260 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 SNX3O60493 162 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 KCNK2O95069 426 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 GOSR1O95249 250 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 ZNF708P17019 499 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
VARS-223ENST00000474643 SEC24CP53992 1094 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 CLDN18P56856 261 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 RPS26P62854 115 aaKnown RBP13.66□□□□□ -0.22
VARS-223ENST00000474643 SIRPAP78324 504 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 PHC1P78364 1004 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 POU4F3Q15319 338 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 BCL2A1Q16548 175 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 CCNJQ5T5M9 372 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 CGB2Q6NT52 195 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 PIGWQ7Z7B1 504 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 MARCH3Q86UD3 253 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 OR2M3Q8NG83 312 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 OR5D16Q8NGK9 328 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 DUSP19Q8WTR2 217 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 NTNG2Q96CW9 530 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 DACH2Q96NX9 599 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 OR7D2Q96RA2 312 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 SLC35A5Q9BS91 424 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 SDR39U1Q9NRG7 319 aaPredicted RBP13.66□□□□□ -0.22
VARS-223ENST00000474643 GPATCH2Q9NW75 528 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 CLCF1Q9UBD9 225 aa13.66□□□□□ -0.22
VARS-223ENST00000474643 A0A1W2PNV4 684 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 FAM234BA2RU67 622 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 CCDC154A6NI56 674 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 DUXAA6NLW8 204 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 ZIC3O60481 467 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 PLGP00747 810 aaPredicted RBP13.65□□□□□ -0.22
VARS-223ENST00000474643 IGKV1D-16P01601 117 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 RAF1P04049 648 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 GSNP06396 782 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 MAP3K8P41279 467 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 ATP4BP51164 291 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 ARFIP2P53365 341 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 CASP9P55211 416 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 C17orf67Q0P5P2 114 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.22
VARS-223ENST00000474643 GRAMD1BQ3KR37 738 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 TIGD2Q4W5G0 525 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 DCST2Q5T1A1 773 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 ATAD3BQ5T9A4 648 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 POMZP3Q6PJE2 187 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
VARS-223ENST00000474643 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 SPATA21Q7Z572 469 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 ANKS4BQ8N8V4 417 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 OR5M1Q8NGP8 315 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 OR9I1Q8NGQ6 314 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 HOXB13Q92826 284 aaPredicted RBP13.65□□□□□ -0.22
VARS-223ENST00000474643 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 CCT8L2Q96SF2 557 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 PINK1Q9BXM7 581 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 OR51I1Q9H343 314 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 LIME1Q9H400 295 aa13.65□□□□□ -0.22
VARS-223ENST00000474643 EXD2Q9NVH0 621 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms