RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 UBQLN4Q9NRR5 601 aa12.16□□□□□ -0.46
BRAT1-205ENST00000473879 FBXO34Q9NWN3 711 aa12.16□□□□□ -0.46
BRAT1-205ENST00000473879 MYOTQ9UBF9 498 aa12.16□□□□□ -0.46
BRAT1-205ENST00000473879 STOML1Q9UBI4 398 aa12.16□□□□□ -0.46
BRAT1-205ENST00000473879 NPFFR2Q9Y5X5 522 aa12.16□□□□□ -0.46
BRAT1-205ENST00000473879 PTPN13Q12923 2485 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 OR6C70A6NIJ9 312 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 TMEM229AB2RXF0 380 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 WWP2O00308 870 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 SCDO00767 359 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 MAN1A2O60476 641 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 TSPAN2O60636 221 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 PPM1BO75688 479 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 UGT2B17O75795 530 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 LGI1O95970 557 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 CD96P40200 585 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 MLF1P58340 268 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ATP6AP1Q15904 470 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ZNF836Q6ZNA1 936 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ZAR1Q86SH2 424 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ZNF614Q8N883 585 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ST6GALNAC3Q8NDV1 305 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 MDS2Q8NDY4 140 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 GPR32P1Q8NGA4 272 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 THAP3Q8WTV1 239 aaPredicted RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 LRTOMTQ8WZ04 291 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ZNF347Q96SE7 839 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 UTP23Q9BRU9 249 aaKnown RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 BDH2Q9BUT1 245 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 NKX1-2Q9UD57 310 aaPredicted RBP12.15□□□□□ -0.46
BRAT1-205ENST00000473879 RIMS3Q9UJD0 308 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 SH3GLB1Q9Y371 365 aa12.15□□□□□ -0.46
BRAT1-205ENST00000473879 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ANKUB1A6NFN9 424 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NPIPA7E9PJI5 369 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NPIPB9F8W1W9 429 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 hCG_2039718K7EN88 272 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 RASAL1O95294 804 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 UTS2O95399 124 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NADKO95544 446 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 CST1P01037 141 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 MT-ND1P03886 318 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NGFRP08138 427 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NPIPA8P0DM63 369 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 EDN3P14138 238 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ENDOUP21128 410 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 TBXA2RP21731 343 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 SESN3P58005 492 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 EEF1A1P68104 462 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 VLDLRP98155 873 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 FGFBP1Q14512 234 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 OR1C1Q15619 314 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 NRF1Q16656 503 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF766Q5HY98 468 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 PDZK1Q5T2W1 519 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 CYP4Z1Q86W10 505 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ZNF227Q86WZ6 799 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 CARM1Q86X55 608 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 DND1Q8IYX4 353 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ZG16BQ96DA0 208 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 CENPNQ96H22 339 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 C7orf34Q96L11 122 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 SIGLEC12Q96PQ1 595 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 TAAR6Q96RI8 345 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ADOQ96SZ5 270 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 PKP2Q99959 881 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 VCX3BQ9H321 246 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 DNAJB9Q9UBS3 223 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 SLC35A3Q9Y2D2 325 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 YARS2Q9Y2Z4 477 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 FAM32AQ9Y421 112 aaKnown RBP12.14□□□□□ -0.47
BRAT1-205ENST00000473879 DTNAQ9Y4J8 743 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 MAST4O15021 2626 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
BRAT1-205ENST00000473879 CDHR4A6H8M9 788 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 H3BNH8 94 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 GNGT2O14610 69 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 CLOCKO15516 846 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ICOSLGO75144 302 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 ITGA10O75578 1167 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 OR2J2O76002 312 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 OXSR1O95747 527 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 CYP4B1P13584 511 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 CD46P15529 392 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 OR1E2P47887 323 aa12.13□□□□□ -0.47
BRAT1-205ENST00000473879 CLK3P49761 638 aaKnown RBP12.13□□□□□ -0.47
BRAT1-205ENST00000473879 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms